Protein–RNA interactions for Protein: Q8K3P5

Cnot6, CCR4-NOT transcription complex subunit 6, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot6Q8K3P5 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Cnot6Q8K3P5 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cnot6Q8K3P5 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cnot6Q8K3P5 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cnot6Q8K3P5 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cnot6Q8K3P5 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cnot6Q8K3P5 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cnot6Q8K3P5 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cnot6Q8K3P5 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cnot6Q8K3P5 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cnot6Q8K3P5 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cnot6Q8K3P5 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cnot6Q8K3P5 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cnot6Q8K3P5 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.63■□□□□ 0.89
Cnot6Q8K3P5 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
Cnot6Q8K3P5 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cnot6Q8K3P5 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cnot6Q8K3P5 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cnot6Q8K3P5 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cnot6Q8K3P5 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cnot6Q8K3P5 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Cnot6Q8K3P5 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.62■□□□□ 0.89
Cnot6Q8K3P5 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cnot6Q8K3P5 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Cnot6Q8K3P5 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Cnot6Q8K3P5 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Cnot6Q8K3P5 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Cnot6Q8K3P5 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cnot6Q8K3P5 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cnot6Q8K3P5 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cnot6Q8K3P5 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cnot6Q8K3P5 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.61■□□□□ 0.89
Cnot6Q8K3P5 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.61■□□□□ 0.89
Cnot6Q8K3P5 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cnot6Q8K3P5 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.61■□□□□ 0.89
Cnot6Q8K3P5 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Cnot6Q8K3P5 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cnot6Q8K3P5 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cnot6Q8K3P5 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cnot6Q8K3P5 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.6■□□□□ 0.89
Cnot6Q8K3P5 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Cnot6Q8K3P5 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cnot6Q8K3P5 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cnot6Q8K3P5 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Cnot6Q8K3P5 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cnot6Q8K3P5 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cnot6Q8K3P5 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cnot6Q8K3P5 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Cnot6Q8K3P5 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cnot6Q8K3P5 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cnot6Q8K3P5 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cnot6Q8K3P5 Gm14523-201ENSMUST00000117260 558 ntBASIC20.59■□□□□ 0.89
Cnot6Q8K3P5 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.59■□□□□ 0.89
Cnot6Q8K3P5 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cnot6Q8K3P5 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cnot6Q8K3P5 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.59■□□□□ 0.89
Cnot6Q8K3P5 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cnot6Q8K3P5 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cnot6Q8K3P5 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.58■□□□□ 0.89
Cnot6Q8K3P5 Gm12366-201ENSMUST00000121722 873 ntBASIC20.58■□□□□ 0.89
Cnot6Q8K3P5 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.58■□□□□ 0.89
Cnot6Q8K3P5 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cnot6Q8K3P5 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.58■□□□□ 0.89
Cnot6Q8K3P5 Gm5786-201ENSMUST00000085368 882 ntBASIC20.58■□□□□ 0.89
Cnot6Q8K3P5 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cnot6Q8K3P5 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cnot6Q8K3P5 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.58■□□□□ 0.88
Cnot6Q8K3P5 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cnot6Q8K3P5 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.57■□□□□ 0.88
Cnot6Q8K3P5 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cnot6Q8K3P5 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.57■□□□□ 0.88
Cnot6Q8K3P5 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cnot6Q8K3P5 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cnot6Q8K3P5 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cnot6Q8K3P5 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cnot6Q8K3P5 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cnot6Q8K3P5 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cnot6Q8K3P5 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.56■□□□□ 0.88
Cnot6Q8K3P5 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cnot6Q8K3P5 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cnot6Q8K3P5 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cnot6Q8K3P5 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Cnot6Q8K3P5 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cnot6Q8K3P5 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Cnot6Q8K3P5 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Cnot6Q8K3P5 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cnot6Q8K3P5 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Cnot6Q8K3P5 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cnot6Q8K3P5 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cnot6Q8K3P5 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.55■□□□□ 0.88
Cnot6Q8K3P5 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cnot6Q8K3P5 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Cnot6Q8K3P5 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cnot6Q8K3P5 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cnot6Q8K3P5 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cnot6Q8K3P5 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cnot6Q8K3P5 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cnot6Q8K3P5 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cnot6Q8K3P5 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Cnot6Q8K3P5 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms