Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmgcs1Q8JZK9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hmgcs1Q8JZK9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmgcs1Q8JZK9 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.18■□□□□ 0.82
Hmgcs1Q8JZK9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Hmgcs1Q8JZK9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmgcs1Q8JZK9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hmgcs1Q8JZK9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.17■□□□□ 0.82
Hmgcs1Q8JZK9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hmgcs1Q8JZK9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hmgcs1Q8JZK9 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hmgcs1Q8JZK9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hmgcs1Q8JZK9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.16■□□□□ 0.82
Hmgcs1Q8JZK9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.16■□□□□ 0.82
Hmgcs1Q8JZK9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.16■□□□□ 0.82
Hmgcs1Q8JZK9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.15■□□□□ 0.82
Hmgcs1Q8JZK9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Hmgcs1Q8JZK9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.15■□□□□ 0.82
Hmgcs1Q8JZK9 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.15■□□□□ 0.82
Hmgcs1Q8JZK9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hmgcs1Q8JZK9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hmgcs1Q8JZK9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Hmgcs1Q8JZK9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Hmgcs1Q8JZK9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hmgcs1Q8JZK9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hmgcs1Q8JZK9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.14■□□□□ 0.81
Hmgcs1Q8JZK9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hmgcs1Q8JZK9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.14■□□□□ 0.81
Hmgcs1Q8JZK9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.14■□□□□ 0.81
Hmgcs1Q8JZK9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Hmgcs1Q8JZK9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hmgcs1Q8JZK9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgcs1Q8JZK9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Hmgcs1Q8JZK9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgcs1Q8JZK9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgcs1Q8JZK9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgcs1Q8JZK9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.13■□□□□ 0.81
Hmgcs1Q8JZK9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hmgcs1Q8JZK9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
Hmgcs1Q8JZK9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.12■□□□□ 0.81
Hmgcs1Q8JZK9 Gm12366-201ENSMUST00000121722 873 ntBASIC20.12■□□□□ 0.81
Hmgcs1Q8JZK9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.12■□□□□ 0.81
Hmgcs1Q8JZK9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.12■□□□□ 0.81
Hmgcs1Q8JZK9 Gm5786-201ENSMUST00000085368 882 ntBASIC20.12■□□□□ 0.81
Hmgcs1Q8JZK9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hmgcs1Q8JZK9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hmgcs1Q8JZK9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmgcs1Q8JZK9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
Hmgcs1Q8JZK9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmgcs1Q8JZK9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Hmgcs1Q8JZK9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Hmgcs1Q8JZK9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmgcs1Q8JZK9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmgcs1Q8JZK9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmgcs1Q8JZK9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmgcs1Q8JZK9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmgcs1Q8JZK9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hmgcs1Q8JZK9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hmgcs1Q8JZK9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hmgcs1Q8JZK9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hmgcs1Q8JZK9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hmgcs1Q8JZK9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hmgcs1Q8JZK9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hmgcs1Q8JZK9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hmgcs1Q8JZK9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hmgcs1Q8JZK9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hmgcs1Q8JZK9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hmgcs1Q8JZK9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.09■□□□□ 0.81
Hmgcs1Q8JZK9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hmgcs1Q8JZK9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hmgcs1Q8JZK9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hmgcs1Q8JZK9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hmgcs1Q8JZK9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Hmgcs1Q8JZK9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.08■□□□□ 0.81
Hmgcs1Q8JZK9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Hmgcs1Q8JZK9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hmgcs1Q8JZK9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hmgcs1Q8JZK9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Hmgcs1Q8JZK9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hmgcs1Q8JZK9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hmgcs1Q8JZK9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hmgcs1Q8JZK9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Hmgcs1Q8JZK9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hmgcs1Q8JZK9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hmgcs1Q8JZK9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hmgcs1Q8JZK9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.07■□□□□ 0.8
Hmgcs1Q8JZK9 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.07■□□□□ 0.8
Hmgcs1Q8JZK9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hmgcs1Q8JZK9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.07■□□□□ 0.8
Hmgcs1Q8JZK9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hmgcs1Q8JZK9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hmgcs1Q8JZK9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hmgcs1Q8JZK9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hmgcs1Q8JZK9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.06■□□□□ 0.8
Hmgcs1Q8JZK9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hmgcs1Q8JZK9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hmgcs1Q8JZK9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hmgcs1Q8JZK9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hmgcs1Q8JZK9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hmgcs1Q8JZK9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms