Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Gm22238-201ENSMUST00000175222 88 ntBASIC20.68■□□□□ 0.9
Rdh1Q8CGV4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rdh1Q8CGV4 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rdh1Q8CGV4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rdh1Q8CGV4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rdh1Q8CGV4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.67■□□□□ 0.9
Rdh1Q8CGV4 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Rdh1Q8CGV4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Rdh1Q8CGV4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Rdh1Q8CGV4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.67■□□□□ 0.9
Rdh1Q8CGV4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rdh1Q8CGV4 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Rdh1Q8CGV4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rdh1Q8CGV4 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rdh1Q8CGV4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.66■□□□□ 0.9
Rdh1Q8CGV4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rdh1Q8CGV4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rdh1Q8CGV4 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rdh1Q8CGV4 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rdh1Q8CGV4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Rdh1Q8CGV4 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rdh1Q8CGV4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rdh1Q8CGV4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.65■□□□□ 0.9
Rdh1Q8CGV4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rdh1Q8CGV4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rdh1Q8CGV4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rdh1Q8CGV4 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.64■□□□□ 0.89
Rdh1Q8CGV4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.64■□□□□ 0.89
Rdh1Q8CGV4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rdh1Q8CGV4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rdh1Q8CGV4 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Rdh1Q8CGV4 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Rdh1Q8CGV4 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rdh1Q8CGV4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rdh1Q8CGV4 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.63■□□□□ 0.89
Rdh1Q8CGV4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rdh1Q8CGV4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rdh1Q8CGV4 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rdh1Q8CGV4 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rdh1Q8CGV4 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rdh1Q8CGV4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.63■□□□□ 0.89
Rdh1Q8CGV4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rdh1Q8CGV4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rdh1Q8CGV4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rdh1Q8CGV4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rdh1Q8CGV4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rdh1Q8CGV4 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Rdh1Q8CGV4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rdh1Q8CGV4 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.61■□□□□ 0.89
Rdh1Q8CGV4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rdh1Q8CGV4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.61■□□□□ 0.89
Rdh1Q8CGV4 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rdh1Q8CGV4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Rdh1Q8CGV4 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.6■□□□□ 0.89
Rdh1Q8CGV4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Rdh1Q8CGV4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rdh1Q8CGV4 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rdh1Q8CGV4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rdh1Q8CGV4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.59■□□□□ 0.89
Rdh1Q8CGV4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rdh1Q8CGV4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rdh1Q8CGV4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rdh1Q8CGV4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rdh1Q8CGV4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rdh1Q8CGV4 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rdh1Q8CGV4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rdh1Q8CGV4 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rdh1Q8CGV4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rdh1Q8CGV4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.58■□□□□ 0.89
Rdh1Q8CGV4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Rdh1Q8CGV4 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Rdh1Q8CGV4 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rdh1Q8CGV4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Rdh1Q8CGV4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rdh1Q8CGV4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rdh1Q8CGV4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Rdh1Q8CGV4 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rdh1Q8CGV4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.57■□□□□ 0.88
Rdh1Q8CGV4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rdh1Q8CGV4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rdh1Q8CGV4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rdh1Q8CGV4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rdh1Q8CGV4 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rdh1Q8CGV4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rdh1Q8CGV4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rdh1Q8CGV4 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rdh1Q8CGV4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.56■□□□□ 0.88
Rdh1Q8CGV4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rdh1Q8CGV4 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rdh1Q8CGV4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rdh1Q8CGV4 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rdh1Q8CGV4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rdh1Q8CGV4 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rdh1Q8CGV4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.55■□□□□ 0.88
Rdh1Q8CGV4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Rdh1Q8CGV4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.55■□□□□ 0.88
Rdh1Q8CGV4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rdh1Q8CGV4 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rdh1Q8CGV4 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rdh1Q8CGV4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms