Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Gm22238-201ENSMUST00000175222 88 ntBASIC20.68■□□□□ 0.9
Rdh1Q8CGV4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rdh1Q8CGV4 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rdh1Q8CGV4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rdh1Q8CGV4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rdh1Q8CGV4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.67■□□□□ 0.9
Rdh1Q8CGV4 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Rdh1Q8CGV4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Rdh1Q8CGV4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Rdh1Q8CGV4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.67■□□□□ 0.9
Rdh1Q8CGV4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rdh1Q8CGV4 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Rdh1Q8CGV4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rdh1Q8CGV4 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rdh1Q8CGV4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.66■□□□□ 0.9
Rdh1Q8CGV4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rdh1Q8CGV4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rdh1Q8CGV4 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rdh1Q8CGV4 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rdh1Q8CGV4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Rdh1Q8CGV4 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rdh1Q8CGV4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rdh1Q8CGV4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.65■□□□□ 0.9
Rdh1Q8CGV4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rdh1Q8CGV4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rdh1Q8CGV4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rdh1Q8CGV4 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.64■□□□□ 0.89
Rdh1Q8CGV4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.64■□□□□ 0.89
Rdh1Q8CGV4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rdh1Q8CGV4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rdh1Q8CGV4 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Rdh1Q8CGV4 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Rdh1Q8CGV4 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rdh1Q8CGV4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rdh1Q8CGV4 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.63■□□□□ 0.89
Rdh1Q8CGV4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rdh1Q8CGV4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rdh1Q8CGV4 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rdh1Q8CGV4 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rdh1Q8CGV4 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rdh1Q8CGV4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.63■□□□□ 0.89
Rdh1Q8CGV4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rdh1Q8CGV4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rdh1Q8CGV4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rdh1Q8CGV4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rdh1Q8CGV4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rdh1Q8CGV4 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Rdh1Q8CGV4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rdh1Q8CGV4 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.61■□□□□ 0.89
Rdh1Q8CGV4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rdh1Q8CGV4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.61■□□□□ 0.89
Rdh1Q8CGV4 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rdh1Q8CGV4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Rdh1Q8CGV4 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.6■□□□□ 0.89
Rdh1Q8CGV4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Rdh1Q8CGV4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rdh1Q8CGV4 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rdh1Q8CGV4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rdh1Q8CGV4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.59■□□□□ 0.89
Rdh1Q8CGV4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rdh1Q8CGV4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rdh1Q8CGV4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rdh1Q8CGV4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rdh1Q8CGV4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rdh1Q8CGV4 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rdh1Q8CGV4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rdh1Q8CGV4 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rdh1Q8CGV4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rdh1Q8CGV4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.58■□□□□ 0.89
Rdh1Q8CGV4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Rdh1Q8CGV4 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Rdh1Q8CGV4 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rdh1Q8CGV4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Rdh1Q8CGV4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rdh1Q8CGV4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rdh1Q8CGV4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Rdh1Q8CGV4 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rdh1Q8CGV4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.57■□□□□ 0.88
Rdh1Q8CGV4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rdh1Q8CGV4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rdh1Q8CGV4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rdh1Q8CGV4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rdh1Q8CGV4 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rdh1Q8CGV4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rdh1Q8CGV4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rdh1Q8CGV4 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rdh1Q8CGV4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.56■□□□□ 0.88
Rdh1Q8CGV4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rdh1Q8CGV4 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rdh1Q8CGV4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rdh1Q8CGV4 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rdh1Q8CGV4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rdh1Q8CGV4 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rdh1Q8CGV4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.55■□□□□ 0.88
Rdh1Q8CGV4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Rdh1Q8CGV4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.55■□□□□ 0.88
Rdh1Q8CGV4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rdh1Q8CGV4 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rdh1Q8CGV4 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rdh1Q8CGV4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms