Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab43Q8CG50 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab43Q8CG50 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rab43Q8CG50 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.72■□□□□ 0.91
Rab43Q8CG50 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab43Q8CG50 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Rab43Q8CG50 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab43Q8CG50 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.71■□□□□ 0.91
Rab43Q8CG50 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rab43Q8CG50 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Rab43Q8CG50 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
Rab43Q8CG50 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rab43Q8CG50 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rab43Q8CG50 Golgb1-201ENSMUST00000023534 498 ntBASIC20.7■□□□□ 0.9
Rab43Q8CG50 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rab43Q8CG50 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.7■□□□□ 0.9
Rab43Q8CG50 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rab43Q8CG50 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rab43Q8CG50 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rab43Q8CG50 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rab43Q8CG50 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rab43Q8CG50 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Rab43Q8CG50 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.69■□□□□ 0.9
Rab43Q8CG50 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.69■□□□□ 0.9
Rab43Q8CG50 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Rab43Q8CG50 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Rab43Q8CG50 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rab43Q8CG50 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rab43Q8CG50 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.68■□□□□ 0.9
Rab43Q8CG50 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rab43Q8CG50 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.68■□□□□ 0.9
Rab43Q8CG50 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.68■□□□□ 0.9
Rab43Q8CG50 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rab43Q8CG50 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rab43Q8CG50 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rab43Q8CG50 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rab43Q8CG50 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rab43Q8CG50 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rab43Q8CG50 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rab43Q8CG50 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rab43Q8CG50 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rab43Q8CG50 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rab43Q8CG50 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rab43Q8CG50 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.66■□□□□ 0.9
Rab43Q8CG50 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rab43Q8CG50 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rab43Q8CG50 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rab43Q8CG50 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rab43Q8CG50 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rab43Q8CG50 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Rab43Q8CG50 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rab43Q8CG50 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.65■□□□□ 0.9
Rab43Q8CG50 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rab43Q8CG50 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rab43Q8CG50 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rab43Q8CG50 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rab43Q8CG50 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.64■□□□□ 0.89
Rab43Q8CG50 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.64■□□□□ 0.89
Rab43Q8CG50 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.64■□□□□ 0.89
Rab43Q8CG50 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rab43Q8CG50 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rab43Q8CG50 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Rab43Q8CG50 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rab43Q8CG50 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Rab43Q8CG50 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rab43Q8CG50 Gm27454-201ENSMUST00000185090 204 ntBASIC20.63■□□□□ 0.89
Rab43Q8CG50 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rab43Q8CG50 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rab43Q8CG50 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rab43Q8CG50 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rab43Q8CG50 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rab43Q8CG50 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rab43Q8CG50 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rab43Q8CG50 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rab43Q8CG50 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.62■□□□□ 0.89
Rab43Q8CG50 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Rab43Q8CG50 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rab43Q8CG50 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rab43Q8CG50 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.62■□□□□ 0.89
Rab43Q8CG50 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rab43Q8CG50 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Rab43Q8CG50 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rab43Q8CG50 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rab43Q8CG50 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rab43Q8CG50 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.6■□□□□ 0.89
Rab43Q8CG50 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rab43Q8CG50 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.6■□□□□ 0.89
Rab43Q8CG50 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Rab43Q8CG50 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rab43Q8CG50 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rab43Q8CG50 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.59■□□□□ 0.89
Rab43Q8CG50 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rab43Q8CG50 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rab43Q8CG50 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rab43Q8CG50 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.58■□□□□ 0.89
Rab43Q8CG50 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rab43Q8CG50 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rab43Q8CG50 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rab43Q8CG50 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rab43Q8CG50 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms