Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Trim52Q8CDV4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
Trim52Q8CDV4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Trim52Q8CDV4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Trim52Q8CDV4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Trim52Q8CDV4 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC26.61■■□□□ 1.85
Trim52Q8CDV4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC26.61■■□□□ 1.85
Trim52Q8CDV4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Trim52Q8CDV4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Trim52Q8CDV4 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
Trim52Q8CDV4 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
Trim52Q8CDV4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Trim52Q8CDV4 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Trim52Q8CDV4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Trim52Q8CDV4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Trim52Q8CDV4 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC26.6■■□□□ 1.85
Trim52Q8CDV4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Trim52Q8CDV4 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
Trim52Q8CDV4 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Trim52Q8CDV4 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
Trim52Q8CDV4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC26.59■■□□□ 1.85
Trim52Q8CDV4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Trim52Q8CDV4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Trim52Q8CDV4 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Trim52Q8CDV4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Trim52Q8CDV4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Trim52Q8CDV4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Trim52Q8CDV4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Trim52Q8CDV4 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Trim52Q8CDV4 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Trim52Q8CDV4 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC26.58■■□□□ 1.85
Trim52Q8CDV4 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC26.58■■□□□ 1.85
Trim52Q8CDV4 Golgb1-201ENSMUST00000023534 498 ntBASIC26.58■■□□□ 1.85
Trim52Q8CDV4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC26.58■■□□□ 1.85
Trim52Q8CDV4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Trim52Q8CDV4 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Trim52Q8CDV4 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Trim52Q8CDV4 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Trim52Q8CDV4 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
Trim52Q8CDV4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Trim52Q8CDV4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Trim52Q8CDV4 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Trim52Q8CDV4 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Trim52Q8CDV4 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC26.56■■□□□ 1.84
Trim52Q8CDV4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC26.56■■□□□ 1.84
Trim52Q8CDV4 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
Trim52Q8CDV4 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
Trim52Q8CDV4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
Trim52Q8CDV4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Trim52Q8CDV4 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Trim52Q8CDV4 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC26.55■■□□□ 1.84
Trim52Q8CDV4 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
Trim52Q8CDV4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Trim52Q8CDV4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC26.54■■□□□ 1.84
Trim52Q8CDV4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Trim52Q8CDV4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC26.54■■□□□ 1.84
Trim52Q8CDV4 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC26.54■■□□□ 1.84
Trim52Q8CDV4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC26.53■■□□□ 1.84
Trim52Q8CDV4 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC26.53■■□□□ 1.84
Trim52Q8CDV4 AC140930.3-201ENSMUST00000222935 274 ntBASIC26.53■■□□□ 1.84
Trim52Q8CDV4 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Trim52Q8CDV4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Trim52Q8CDV4 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
Trim52Q8CDV4 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Trim52Q8CDV4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
Trim52Q8CDV4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC26.51■■□□□ 1.84
Trim52Q8CDV4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.84
Trim52Q8CDV4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Trim52Q8CDV4 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Trim52Q8CDV4 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
Trim52Q8CDV4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Trim52Q8CDV4 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Trim52Q8CDV4 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Trim52Q8CDV4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Trim52Q8CDV4 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Trim52Q8CDV4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Trim52Q8CDV4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC26.5■■□□□ 1.83
Trim52Q8CDV4 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Trim52Q8CDV4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC26.49■■□□□ 1.83
Trim52Q8CDV4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Trim52Q8CDV4 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Trim52Q8CDV4 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Trim52Q8CDV4 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Trim52Q8CDV4 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
Trim52Q8CDV4 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
Trim52Q8CDV4 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Trim52Q8CDV4 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Trim52Q8CDV4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
Trim52Q8CDV4 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Trim52Q8CDV4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Trim52Q8CDV4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Trim52Q8CDV4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Trim52Q8CDV4 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Trim52Q8CDV4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC26.47■■□□□ 1.83
Trim52Q8CDV4 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Trim52Q8CDV4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Trim52Q8CDV4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Trim52Q8CDV4 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Trim52Q8CDV4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
Trim52Q8CDV4 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms