Protein–RNA interactions for Protein: Q8C8M1

Sinhcaf, SIN3-HDAC complex-associated factor, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SinhcafQ8C8M1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SinhcafQ8C8M1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SinhcafQ8C8M1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SinhcafQ8C8M1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SinhcafQ8C8M1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SinhcafQ8C8M1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SinhcafQ8C8M1 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SinhcafQ8C8M1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SinhcafQ8C8M1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.27■□□□□ 0.84
SinhcafQ8C8M1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SinhcafQ8C8M1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.27■□□□□ 0.83
SinhcafQ8C8M1 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SinhcafQ8C8M1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SinhcafQ8C8M1 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SinhcafQ8C8M1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SinhcafQ8C8M1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
SinhcafQ8C8M1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SinhcafQ8C8M1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SinhcafQ8C8M1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.26■□□□□ 0.83
SinhcafQ8C8M1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.26■□□□□ 0.83
SinhcafQ8C8M1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SinhcafQ8C8M1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SinhcafQ8C8M1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SinhcafQ8C8M1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.26■□□□□ 0.83
SinhcafQ8C8M1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SinhcafQ8C8M1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SinhcafQ8C8M1 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SinhcafQ8C8M1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SinhcafQ8C8M1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SinhcafQ8C8M1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SinhcafQ8C8M1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SinhcafQ8C8M1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SinhcafQ8C8M1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SinhcafQ8C8M1 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SinhcafQ8C8M1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SinhcafQ8C8M1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SinhcafQ8C8M1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SinhcafQ8C8M1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SinhcafQ8C8M1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.24■□□□□ 0.83
SinhcafQ8C8M1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SinhcafQ8C8M1 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SinhcafQ8C8M1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SinhcafQ8C8M1 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SinhcafQ8C8M1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.23■□□□□ 0.83
SinhcafQ8C8M1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SinhcafQ8C8M1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SinhcafQ8C8M1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.23■□□□□ 0.83
SinhcafQ8C8M1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SinhcafQ8C8M1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SinhcafQ8C8M1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SinhcafQ8C8M1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SinhcafQ8C8M1 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.22■□□□□ 0.83
SinhcafQ8C8M1 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SinhcafQ8C8M1 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SinhcafQ8C8M1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SinhcafQ8C8M1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.21■□□□□ 0.83
SinhcafQ8C8M1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SinhcafQ8C8M1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SinhcafQ8C8M1 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SinhcafQ8C8M1 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SinhcafQ8C8M1 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.21■□□□□ 0.83
SinhcafQ8C8M1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.21■□□□□ 0.83
SinhcafQ8C8M1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.21■□□□□ 0.83
SinhcafQ8C8M1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SinhcafQ8C8M1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SinhcafQ8C8M1 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SinhcafQ8C8M1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SinhcafQ8C8M1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SinhcafQ8C8M1 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SinhcafQ8C8M1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.2■□□□□ 0.82
SinhcafQ8C8M1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SinhcafQ8C8M1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SinhcafQ8C8M1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SinhcafQ8C8M1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.2■□□□□ 0.82
SinhcafQ8C8M1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SinhcafQ8C8M1 Gm22238-201ENSMUST00000175222 88 ntBASIC20.2■□□□□ 0.82
SinhcafQ8C8M1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SinhcafQ8C8M1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SinhcafQ8C8M1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.19■□□□□ 0.82
SinhcafQ8C8M1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SinhcafQ8C8M1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SinhcafQ8C8M1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SinhcafQ8C8M1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SinhcafQ8C8M1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SinhcafQ8C8M1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SinhcafQ8C8M1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SinhcafQ8C8M1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.19■□□□□ 0.82
SinhcafQ8C8M1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SinhcafQ8C8M1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SinhcafQ8C8M1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.17■□□□□ 0.82
SinhcafQ8C8M1 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SinhcafQ8C8M1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SinhcafQ8C8M1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SinhcafQ8C8M1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SinhcafQ8C8M1 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
SinhcafQ8C8M1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SinhcafQ8C8M1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SinhcafQ8C8M1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.16■□□□□ 0.82
SinhcafQ8C8M1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.16■□□□□ 0.82
SinhcafQ8C8M1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms