Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Upk3bQ80YF6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upk3bQ80YF6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upk3bQ80YF6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
Upk3bQ80YF6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.87■□□□□ 0.45
Upk3bQ80YF6 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Upk3bQ80YF6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upk3bQ80YF6 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upk3bQ80YF6 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upk3bQ80YF6 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.87■□□□□ 0.45
Upk3bQ80YF6 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upk3bQ80YF6 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upk3bQ80YF6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upk3bQ80YF6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Upk3bQ80YF6 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upk3bQ80YF6 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Upk3bQ80YF6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upk3bQ80YF6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.86■□□□□ 0.45
Upk3bQ80YF6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Upk3bQ80YF6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Upk3bQ80YF6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Upk3bQ80YF6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Upk3bQ80YF6 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Upk3bQ80YF6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Upk3bQ80YF6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Upk3bQ80YF6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
Upk3bQ80YF6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Upk3bQ80YF6 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Upk3bQ80YF6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Upk3bQ80YF6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
Upk3bQ80YF6 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Upk3bQ80YF6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Upk3bQ80YF6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Upk3bQ80YF6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Upk3bQ80YF6 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Upk3bQ80YF6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.84■□□□□ 0.45
Upk3bQ80YF6 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Upk3bQ80YF6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Upk3bQ80YF6 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Upk3bQ80YF6 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
Upk3bQ80YF6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.83■□□□□ 0.44
Upk3bQ80YF6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Upk3bQ80YF6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Upk3bQ80YF6 Gm6311-201ENSMUST00000073790 878 ntBASIC17.83■□□□□ 0.44
Upk3bQ80YF6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Upk3bQ80YF6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.82■□□□□ 0.44
Upk3bQ80YF6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Upk3bQ80YF6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Upk3bQ80YF6 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Upk3bQ80YF6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Upk3bQ80YF6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Upk3bQ80YF6 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Upk3bQ80YF6 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Upk3bQ80YF6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Upk3bQ80YF6 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Upk3bQ80YF6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Upk3bQ80YF6 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Upk3bQ80YF6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Upk3bQ80YF6 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Upk3bQ80YF6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Upk3bQ80YF6 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Upk3bQ80YF6 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Upk3bQ80YF6 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Upk3bQ80YF6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Upk3bQ80YF6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Upk3bQ80YF6 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Upk3bQ80YF6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.8■□□□□ 0.44
Upk3bQ80YF6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Upk3bQ80YF6 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.8■□□□□ 0.44
Upk3bQ80YF6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Upk3bQ80YF6 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.8■□□□□ 0.44
Upk3bQ80YF6 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Upk3bQ80YF6 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Upk3bQ80YF6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Upk3bQ80YF6 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Upk3bQ80YF6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Upk3bQ80YF6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Upk3bQ80YF6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Upk3bQ80YF6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Upk3bQ80YF6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Upk3bQ80YF6 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Upk3bQ80YF6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.79■□□□□ 0.44
Upk3bQ80YF6 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Upk3bQ80YF6 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Upk3bQ80YF6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Upk3bQ80YF6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Upk3bQ80YF6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Upk3bQ80YF6 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Upk3bQ80YF6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Upk3bQ80YF6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Upk3bQ80YF6 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Upk3bQ80YF6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Upk3bQ80YF6 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Upk3bQ80YF6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Upk3bQ80YF6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Upk3bQ80YF6 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.77■□□□□ 0.44
Upk3bQ80YF6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.77■□□□□ 0.44
Upk3bQ80YF6 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Upk3bQ80YF6 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Upk3bQ80YF6 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms