Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
VclQ64727 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VclQ64727 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VclQ64727 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VclQ64727 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VclQ64727 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VclQ64727 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VclQ64727 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
VclQ64727 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VclQ64727 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
VclQ64727 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
VclQ64727 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.77■□□□□ 0.92
VclQ64727 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
VclQ64727 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
VclQ64727 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
VclQ64727 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VclQ64727 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
VclQ64727 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
VclQ64727 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VclQ64727 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VclQ64727 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
VclQ64727 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VclQ64727 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VclQ64727 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VclQ64727 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VclQ64727 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
VclQ64727 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.75■□□□□ 0.91
VclQ64727 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VclQ64727 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
VclQ64727 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
VclQ64727 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
VclQ64727 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VclQ64727 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VclQ64727 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
VclQ64727 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.73■□□□□ 0.91
VclQ64727 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.73■□□□□ 0.91
VclQ64727 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
VclQ64727 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VclQ64727 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
VclQ64727 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
VclQ64727 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
VclQ64727 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VclQ64727 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
VclQ64727 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.73■□□□□ 0.91
VclQ64727 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VclQ64727 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VclQ64727 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VclQ64727 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VclQ64727 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.72■□□□□ 0.91
VclQ64727 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.72■□□□□ 0.91
VclQ64727 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VclQ64727 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VclQ64727 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VclQ64727 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VclQ64727 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VclQ64727 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VclQ64727 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VclQ64727 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.71■□□□□ 0.91
VclQ64727 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.71■□□□□ 0.91
VclQ64727 Rps24-207ENSMUST00000224568 714 ntBASIC20.71■□□□□ 0.91
VclQ64727 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VclQ64727 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VclQ64727 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VclQ64727 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VclQ64727 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VclQ64727 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VclQ64727 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VclQ64727 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VclQ64727 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
VclQ64727 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
VclQ64727 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
VclQ64727 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
VclQ64727 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
VclQ64727 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
VclQ64727 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.69■□□□□ 0.9
VclQ64727 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.69■□□□□ 0.9
VclQ64727 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VclQ64727 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VclQ64727 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.69■□□□□ 0.9
VclQ64727 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VclQ64727 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
VclQ64727 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
VclQ64727 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VclQ64727 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VclQ64727 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VclQ64727 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VclQ64727 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VclQ64727 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VclQ64727 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
VclQ64727 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
VclQ64727 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VclQ64727 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VclQ64727 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
VclQ64727 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
VclQ64727 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
VclQ64727 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
VclQ64727 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VclQ64727 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VclQ64727 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VclQ64727 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms