Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn4Q61418 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.39■□□□□ 0.69
Clcn4Q61418 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn4Q61418 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn4Q61418 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn4Q61418 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Clcn4Q61418 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Clcn4Q61418 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn4Q61418 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Clcn4Q61418 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.37■□□□□ 0.69
Clcn4Q61418 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn4Q61418 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn4Q61418 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn4Q61418 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn4Q61418 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn4Q61418 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn4Q61418 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn4Q61418 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn4Q61418 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn4Q61418 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn4Q61418 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn4Q61418 Gm5921-201ENSMUST00000075898 882 ntBASIC19.36■□□□□ 0.69
Clcn4Q61418 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Clcn4Q61418 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Clcn4Q61418 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn4Q61418 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn4Q61418 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Clcn4Q61418 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn4Q61418 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn4Q61418 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.35■□□□□ 0.69
Clcn4Q61418 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.35■□□□□ 0.69
Clcn4Q61418 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn4Q61418 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Clcn4Q61418 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn4Q61418 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn4Q61418 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.35■□□□□ 0.69
Clcn4Q61418 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn4Q61418 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn4Q61418 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn4Q61418 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn4Q61418 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.34■□□□□ 0.69
Clcn4Q61418 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn4Q61418 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn4Q61418 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Clcn4Q61418 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn4Q61418 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Clcn4Q61418 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.34■□□□□ 0.69
Clcn4Q61418 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn4Q61418 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn4Q61418 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn4Q61418 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn4Q61418 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.34■□□□□ 0.69
Clcn4Q61418 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Clcn4Q61418 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clcn4Q61418 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Clcn4Q61418 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.33■□□□□ 0.68
Clcn4Q61418 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn4Q61418 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn4Q61418 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
Clcn4Q61418 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn4Q61418 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn4Q61418 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn4Q61418 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn4Q61418 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.32■□□□□ 0.68
Clcn4Q61418 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Clcn4Q61418 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Clcn4Q61418 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Clcn4Q61418 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.3■□□□□ 0.68
Clcn4Q61418 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn4Q61418 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn4Q61418 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Clcn4Q61418 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
Clcn4Q61418 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Clcn4Q61418 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.3■□□□□ 0.68
Clcn4Q61418 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.3■□□□□ 0.68
Clcn4Q61418 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn4Q61418 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn4Q61418 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn4Q61418 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.29■□□□□ 0.68
Clcn4Q61418 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn4Q61418 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Clcn4Q61418 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn4Q61418 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn4Q61418 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn4Q61418 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clcn4Q61418 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Clcn4Q61418 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Clcn4Q61418 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.28■□□□□ 0.68
Clcn4Q61418 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.28■□□□□ 0.68
Clcn4Q61418 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn4Q61418 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.27■□□□□ 0.68
Clcn4Q61418 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Clcn4Q61418 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn4Q61418 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Clcn4Q61418 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn4Q61418 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Clcn4Q61418 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn4Q61418 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Clcn4Q61418 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clcn4Q61418 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms