Protein–RNA interactions for Protein: Q5U452

Trp53rka, MCG14616, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53rkaQ5U452 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trp53rkaQ5U452 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trp53rkaQ5U452 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Trp53rkaQ5U452 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trp53rkaQ5U452 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trp53rkaQ5U452 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trp53rkaQ5U452 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trp53rkaQ5U452 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Trp53rkaQ5U452 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trp53rkaQ5U452 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trp53rkaQ5U452 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trp53rkaQ5U452 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trp53rkaQ5U452 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.58■□□□□ 0.25
Trp53rkaQ5U452 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trp53rkaQ5U452 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trp53rkaQ5U452 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC16.58■□□□□ 0.24
Trp53rkaQ5U452 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC16.58■□□□□ 0.24
Trp53rkaQ5U452 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC16.58■□□□□ 0.24
Trp53rkaQ5U452 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trp53rkaQ5U452 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trp53rkaQ5U452 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trp53rkaQ5U452 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trp53rkaQ5U452 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trp53rkaQ5U452 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trp53rkaQ5U452 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.57■□□□□ 0.24
Trp53rkaQ5U452 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trp53rkaQ5U452 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.56■□□□□ 0.24
Trp53rkaQ5U452 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trp53rkaQ5U452 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trp53rkaQ5U452 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Trp53rkaQ5U452 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trp53rkaQ5U452 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trp53rkaQ5U452 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trp53rkaQ5U452 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC16.55■□□□□ 0.24
Trp53rkaQ5U452 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trp53rkaQ5U452 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trp53rkaQ5U452 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trp53rkaQ5U452 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trp53rkaQ5U452 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trp53rkaQ5U452 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trp53rkaQ5U452 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trp53rkaQ5U452 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trp53rkaQ5U452 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trp53rkaQ5U452 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trp53rkaQ5U452 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trp53rkaQ5U452 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trp53rkaQ5U452 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trp53rkaQ5U452 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trp53rkaQ5U452 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.53■□□□□ 0.24
Trp53rkaQ5U452 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trp53rkaQ5U452 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trp53rkaQ5U452 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trp53rkaQ5U452 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trp53rkaQ5U452 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trp53rkaQ5U452 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trp53rkaQ5U452 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trp53rkaQ5U452 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trp53rkaQ5U452 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trp53rkaQ5U452 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trp53rkaQ5U452 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trp53rkaQ5U452 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trp53rkaQ5U452 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Trp53rkaQ5U452 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trp53rkaQ5U452 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC16.52■□□□□ 0.24
Trp53rkaQ5U452 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trp53rkaQ5U452 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trp53rkaQ5U452 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trp53rkaQ5U452 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
Trp53rkaQ5U452 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trp53rkaQ5U452 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Trp53rkaQ5U452 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trp53rkaQ5U452 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trp53rkaQ5U452 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trp53rkaQ5U452 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Trp53rkaQ5U452 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trp53rkaQ5U452 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trp53rkaQ5U452 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trp53rkaQ5U452 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trp53rkaQ5U452 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trp53rkaQ5U452 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trp53rkaQ5U452 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.5■□□□□ 0.23
Trp53rkaQ5U452 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trp53rkaQ5U452 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trp53rkaQ5U452 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trp53rkaQ5U452 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC16.5■□□□□ 0.23
Trp53rkaQ5U452 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trp53rkaQ5U452 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.5■□□□□ 0.23
Trp53rkaQ5U452 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trp53rkaQ5U452 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trp53rkaQ5U452 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trp53rkaQ5U452 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Trp53rkaQ5U452 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trp53rkaQ5U452 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC16.49■□□□□ 0.23
Trp53rkaQ5U452 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trp53rkaQ5U452 Nkain2-201ENSMUST00000092602 558 ntBASIC16.49■□□□□ 0.23
Trp53rkaQ5U452 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trp53rkaQ5U452 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Trp53rkaQ5U452 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.48■□□□□ 0.23
Trp53rkaQ5U452 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trp53rkaQ5U452 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms