Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav2Q5R1I9 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC16.85■□□□□ 0.29
Trav2Q5R1I9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav2Q5R1I9 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav2Q5R1I9 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav2Q5R1I9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav2Q5R1I9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav2Q5R1I9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav2Q5R1I9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav2Q5R1I9 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav2Q5R1I9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav2Q5R1I9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav2Q5R1I9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.84■□□□□ 0.29
Trav2Q5R1I9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav2Q5R1I9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.84■□□□□ 0.29
Trav2Q5R1I9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.84■□□□□ 0.29
Trav2Q5R1I9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.84■□□□□ 0.29
Trav2Q5R1I9 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav2Q5R1I9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Trav2Q5R1I9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav2Q5R1I9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav2Q5R1I9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Trav2Q5R1I9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav2Q5R1I9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav2Q5R1I9 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trav2Q5R1I9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav2Q5R1I9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav2Q5R1I9 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav2Q5R1I9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav2Q5R1I9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav2Q5R1I9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trav2Q5R1I9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.82■□□□□ 0.28
Trav2Q5R1I9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trav2Q5R1I9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav2Q5R1I9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav2Q5R1I9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav2Q5R1I9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav2Q5R1I9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav2Q5R1I9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav2Q5R1I9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav2Q5R1I9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trav2Q5R1I9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Trav2Q5R1I9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav2Q5R1I9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav2Q5R1I9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav2Q5R1I9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trav2Q5R1I9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Trav2Q5R1I9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trav2Q5R1I9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Trav2Q5R1I9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav2Q5R1I9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav2Q5R1I9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav2Q5R1I9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.8■□□□□ 0.28
Trav2Q5R1I9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.8■□□□□ 0.28
Trav2Q5R1I9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.8■□□□□ 0.28
Trav2Q5R1I9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav2Q5R1I9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav2Q5R1I9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav2Q5R1I9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav2Q5R1I9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.79■□□□□ 0.28
Trav2Q5R1I9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav2Q5R1I9 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.79■□□□□ 0.28
Trav2Q5R1I9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.79■□□□□ 0.28
Trav2Q5R1I9 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.79■□□□□ 0.28
Trav2Q5R1I9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav2Q5R1I9 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.79■□□□□ 0.28
Trav2Q5R1I9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav2Q5R1I9 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav2Q5R1I9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav2Q5R1I9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav2Q5R1I9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav2Q5R1I9 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trav2Q5R1I9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav2Q5R1I9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav2Q5R1I9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.78■□□□□ 0.28
Trav2Q5R1I9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav2Q5R1I9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav2Q5R1I9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav2Q5R1I9 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav2Q5R1I9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav2Q5R1I9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav2Q5R1I9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav2Q5R1I9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav2Q5R1I9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav2Q5R1I9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav2Q5R1I9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
Trav2Q5R1I9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav2Q5R1I9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav2Q5R1I9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trav2Q5R1I9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav2Q5R1I9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav2Q5R1I9 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav2Q5R1I9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav2Q5R1I9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav2Q5R1I9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav2Q5R1I9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav2Q5R1I9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav2Q5R1I9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.76■□□□□ 0.27
Trav2Q5R1I9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav2Q5R1I9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms