Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Gm43137-201ENSMUST00000198052 594 ntBASIC20.96■□□□□ 0.95
Trav8d-2Q5R1B6 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.96■□□□□ 0.95
Trav8d-2Q5R1B6 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trav8d-2Q5R1B6 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trav8d-2Q5R1B6 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Trav8d-2Q5R1B6 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trav8d-2Q5R1B6 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trav8d-2Q5R1B6 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
Trav8d-2Q5R1B6 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trav8d-2Q5R1B6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Trav8d-2Q5R1B6 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.95■□□□□ 0.94
Trav8d-2Q5R1B6 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Trav8d-2Q5R1B6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trav8d-2Q5R1B6 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Trav8d-2Q5R1B6 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.94■□□□□ 0.94
Trav8d-2Q5R1B6 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.93■□□□□ 0.94
Trav8d-2Q5R1B6 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trav8d-2Q5R1B6 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trav8d-2Q5R1B6 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trav8d-2Q5R1B6 Mir7075-201ENSMUST00000184187 82 ntBASIC20.93■□□□□ 0.94
Trav8d-2Q5R1B6 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.93■□□□□ 0.94
Trav8d-2Q5R1B6 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trav8d-2Q5R1B6 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.93■□□□□ 0.94
Trav8d-2Q5R1B6 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trav8d-2Q5R1B6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav8d-2Q5R1B6 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Trav8d-2Q5R1B6 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trav8d-2Q5R1B6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Trav8d-2Q5R1B6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav8d-2Q5R1B6 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav8d-2Q5R1B6 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Trav8d-2Q5R1B6 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trav8d-2Q5R1B6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trav8d-2Q5R1B6 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trav8d-2Q5R1B6 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trav8d-2Q5R1B6 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trav8d-2Q5R1B6 Gm43017-201ENSMUST00000198296 752 ntBASIC20.9■□□□□ 0.94
Trav8d-2Q5R1B6 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
Trav8d-2Q5R1B6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Trav8d-2Q5R1B6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.89■□□□□ 0.94
Trav8d-2Q5R1B6 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trav8d-2Q5R1B6 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trav8d-2Q5R1B6 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.89■□□□□ 0.93
Trav8d-2Q5R1B6 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Trav8d-2Q5R1B6 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.89■□□□□ 0.93
Trav8d-2Q5R1B6 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trav8d-2Q5R1B6 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trav8d-2Q5R1B6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trav8d-2Q5R1B6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trav8d-2Q5R1B6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trav8d-2Q5R1B6 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav8d-2Q5R1B6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav8d-2Q5R1B6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav8d-2Q5R1B6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
Trav8d-2Q5R1B6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.88■□□□□ 0.93
Trav8d-2Q5R1B6 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav8d-2Q5R1B6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav8d-2Q5R1B6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav8d-2Q5R1B6 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav8d-2Q5R1B6 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav8d-2Q5R1B6 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav8d-2Q5R1B6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav8d-2Q5R1B6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trav8d-2Q5R1B6 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.86■□□□□ 0.93
Trav8d-2Q5R1B6 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trav8d-2Q5R1B6 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
Trav8d-2Q5R1B6 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trav8d-2Q5R1B6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trav8d-2Q5R1B6 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trav8d-2Q5R1B6 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trav8d-2Q5R1B6 Gm8493-201ENSMUST00000196881 489 ntBASIC20.85■□□□□ 0.93
Trav8d-2Q5R1B6 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.85■□□□□ 0.93
Trav8d-2Q5R1B6 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trav8d-2Q5R1B6 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trav8d-2Q5R1B6 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Trav8d-2Q5R1B6 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trav8d-2Q5R1B6 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Trav8d-2Q5R1B6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Trav8d-2Q5R1B6 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trav8d-2Q5R1B6 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Trav8d-2Q5R1B6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trav8d-2Q5R1B6 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trav8d-2Q5R1B6 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.84■□□□□ 0.93
Trav8d-2Q5R1B6 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.84■□□□□ 0.93
Trav8d-2Q5R1B6 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trav8d-2Q5R1B6 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Trav8d-2Q5R1B6 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trav8d-2Q5R1B6 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trav8d-2Q5R1B6 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Trav8d-2Q5R1B6 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
Trav8d-2Q5R1B6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trav8d-2Q5R1B6 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trav8d-2Q5R1B6 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trav8d-2Q5R1B6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trav8d-2Q5R1B6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trav8d-2Q5R1B6 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.82■□□□□ 0.92
Trav8d-2Q5R1B6 Gm29257-201ENSMUST00000186115 639 ntBASIC20.82■□□□□ 0.92
Trav8d-2Q5R1B6 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.82■□□□□ 0.92
Trav8d-2Q5R1B6 Gm5874-201ENSMUST00000096101 508 ntBASIC20.82■□□□□ 0.92
Trav8d-2Q5R1B6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms