Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Scn2bQ56A07 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scn2bQ56A07 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scn2bQ56A07 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Scn2bQ56A07 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scn2bQ56A07 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Scn2bQ56A07 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
Scn2bQ56A07 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scn2bQ56A07 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scn2bQ56A07 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scn2bQ56A07 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Scn2bQ56A07 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn2bQ56A07 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Scn2bQ56A07 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.91■□□□□ 0.94
Scn2bQ56A07 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Scn2bQ56A07 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn2bQ56A07 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn2bQ56A07 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn2bQ56A07 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Scn2bQ56A07 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scn2bQ56A07 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scn2bQ56A07 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Scn2bQ56A07 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scn2bQ56A07 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scn2bQ56A07 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn2bQ56A07 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn2bQ56A07 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Scn2bQ56A07 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn2bQ56A07 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Scn2bQ56A07 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn2bQ56A07 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn2bQ56A07 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn2bQ56A07 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Scn2bQ56A07 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn2bQ56A07 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Scn2bQ56A07 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn2bQ56A07 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn2bQ56A07 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn2bQ56A07 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn2bQ56A07 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn2bQ56A07 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Scn2bQ56A07 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
Scn2bQ56A07 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn2bQ56A07 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Scn2bQ56A07 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.86■□□□□ 0.93
Scn2bQ56A07 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Scn2bQ56A07 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Scn2bQ56A07 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scn2bQ56A07 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scn2bQ56A07 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Scn2bQ56A07 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Scn2bQ56A07 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scn2bQ56A07 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scn2bQ56A07 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scn2bQ56A07 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Scn2bQ56A07 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scn2bQ56A07 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scn2bQ56A07 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.84■□□□□ 0.93
Scn2bQ56A07 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn2bQ56A07 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn2bQ56A07 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn2bQ56A07 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Scn2bQ56A07 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn2bQ56A07 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn2bQ56A07 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn2bQ56A07 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn2bQ56A07 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn2bQ56A07 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Scn2bQ56A07 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Scn2bQ56A07 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Scn2bQ56A07 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.82■□□□□ 0.92
Scn2bQ56A07 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
Scn2bQ56A07 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn2bQ56A07 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.82■□□□□ 0.92
Scn2bQ56A07 Gm10420-201ENSMUST00000121713 882 ntBASIC20.82■□□□□ 0.92
Scn2bQ56A07 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.82■□□□□ 0.92
Scn2bQ56A07 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Scn2bQ56A07 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Scn2bQ56A07 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
Scn2bQ56A07 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn2bQ56A07 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn2bQ56A07 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn2bQ56A07 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn2bQ56A07 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn2bQ56A07 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.81■□□□□ 0.92
Scn2bQ56A07 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Scn2bQ56A07 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn2bQ56A07 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn2bQ56A07 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Scn2bQ56A07 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn2bQ56A07 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
Scn2bQ56A07 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Scn2bQ56A07 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn2bQ56A07 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.8■□□□□ 0.92
Scn2bQ56A07 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn2bQ56A07 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn2bQ56A07 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn2bQ56A07 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn2bQ56A07 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn2bQ56A07 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms