Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Cks1brtQ3UNC9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cks1brtQ3UNC9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cks1brtQ3UNC9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cks1brtQ3UNC9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Cks1brtQ3UNC9 Gm4419-202ENSMUST00000226239 1431 ntBASIC15.33■□□□□ 0.04
Cks1brtQ3UNC9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cks1brtQ3UNC9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cks1brtQ3UNC9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC15.33■□□□□ 0.04
Cks1brtQ3UNC9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Cks1brtQ3UNC9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cks1brtQ3UNC9 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cks1brtQ3UNC9 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cks1brtQ3UNC9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Cks1brtQ3UNC9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cks1brtQ3UNC9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Cks1brtQ3UNC9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cks1brtQ3UNC9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cks1brtQ3UNC9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cks1brtQ3UNC9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cks1brtQ3UNC9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cks1brtQ3UNC9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cks1brtQ3UNC9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cks1brtQ3UNC9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cks1brtQ3UNC9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cks1brtQ3UNC9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cks1brtQ3UNC9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cks1brtQ3UNC9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cks1brtQ3UNC9 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cks1brtQ3UNC9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cks1brtQ3UNC9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC15.31■□□□□ 0.04
Cks1brtQ3UNC9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cks1brtQ3UNC9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cks1brtQ3UNC9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.31■□□□□ 0.04
Cks1brtQ3UNC9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Cks1brtQ3UNC9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cks1brtQ3UNC9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cks1brtQ3UNC9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cks1brtQ3UNC9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cks1brtQ3UNC9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cks1brtQ3UNC9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cks1brtQ3UNC9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
Cks1brtQ3UNC9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cks1brtQ3UNC9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cks1brtQ3UNC9 Gm14121-201ENSMUST00000121441 1380 ntBASIC15.29■□□□□ 0.04
Cks1brtQ3UNC9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cks1brtQ3UNC9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cks1brtQ3UNC9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cks1brtQ3UNC9 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cks1brtQ3UNC9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cks1brtQ3UNC9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cks1brtQ3UNC9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cks1brtQ3UNC9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cks1brtQ3UNC9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cks1brtQ3UNC9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cks1brtQ3UNC9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cks1brtQ3UNC9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cks1brtQ3UNC9 Iqck-206ENSMUST00000208658 2891 ntBASIC15.28■□□□□ 0.04
Cks1brtQ3UNC9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cks1brtQ3UNC9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cks1brtQ3UNC9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cks1brtQ3UNC9 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cks1brtQ3UNC9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cks1brtQ3UNC9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Cks1brtQ3UNC9 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cks1brtQ3UNC9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cks1brtQ3UNC9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cks1brtQ3UNC9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cks1brtQ3UNC9 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cks1brtQ3UNC9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cks1brtQ3UNC9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Cks1brtQ3UNC9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cks1brtQ3UNC9 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cks1brtQ3UNC9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cks1brtQ3UNC9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cks1brtQ3UNC9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cks1brtQ3UNC9 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cks1brtQ3UNC9 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cks1brtQ3UNC9 Gm16148-201ENSMUST00000119653 893 ntBASIC15.26■□□□□ 0.03
Cks1brtQ3UNC9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cks1brtQ3UNC9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cks1brtQ3UNC9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cks1brtQ3UNC9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cks1brtQ3UNC9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
Cks1brtQ3UNC9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cks1brtQ3UNC9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC15.26■□□□□ 0.03
Cks1brtQ3UNC9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cks1brtQ3UNC9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cks1brtQ3UNC9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cks1brtQ3UNC9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cks1brtQ3UNC9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Cks1brtQ3UNC9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cks1brtQ3UNC9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cks1brtQ3UNC9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cks1brtQ3UNC9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cks1brtQ3UNC9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cks1brtQ3UNC9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cks1brtQ3UNC9 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cks1brtQ3UNC9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC15.25■□□□□ 0.03
Cks1brtQ3UNC9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms