Protein–RNA interactions for Protein: P82976

Gbx1, Homeobox protein GBX-1, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbx1P82976 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gbx1P82976 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Gbx1P82976 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.85■□□□□ 0.77
Gbx1P82976 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gbx1P82976 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.85■□□□□ 0.77
Gbx1P82976 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.85■□□□□ 0.77
Gbx1P82976 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.85■□□□□ 0.77
Gbx1P82976 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.85■□□□□ 0.77
Gbx1P82976 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gbx1P82976 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gbx1P82976 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gbx1P82976 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gbx1P82976 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Gbx1P82976 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gbx1P82976 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gbx1P82976 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gbx1P82976 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gbx1P82976 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Gbx1P82976 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gbx1P82976 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gbx1P82976 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gbx1P82976 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.83■□□□□ 0.77
Gbx1P82976 Gm12366-201ENSMUST00000121722 873 ntBASIC19.83■□□□□ 0.77
Gbx1P82976 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.83■□□□□ 0.77
Gbx1P82976 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Gbx1P82976 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.83■□□□□ 0.77
Gbx1P82976 Gm5786-201ENSMUST00000085368 882 ntBASIC19.83■□□□□ 0.77
Gbx1P82976 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gbx1P82976 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gbx1P82976 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.83■□□□□ 0.76
Gbx1P82976 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.83■□□□□ 0.76
Gbx1P82976 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gbx1P82976 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gbx1P82976 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gbx1P82976 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gbx1P82976 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
Gbx1P82976 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.82■□□□□ 0.76
Gbx1P82976 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gbx1P82976 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.82■□□□□ 0.76
Gbx1P82976 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Gbx1P82976 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gbx1P82976 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gbx1P82976 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gbx1P82976 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gbx1P82976 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gbx1P82976 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gbx1P82976 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.81■□□□□ 0.76
Gbx1P82976 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.81■□□□□ 0.76
Gbx1P82976 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gbx1P82976 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gbx1P82976 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gbx1P82976 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gbx1P82976 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gbx1P82976 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
Gbx1P82976 Mir6538-201ENSMUST00000183713 110 ntBASIC19.8■□□□□ 0.76
Gbx1P82976 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gbx1P82976 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gbx1P82976 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Gbx1P82976 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gbx1P82976 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gbx1P82976 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gbx1P82976 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gbx1P82976 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Gbx1P82976 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.78■□□□□ 0.76
Gbx1P82976 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.78■□□□□ 0.76
Gbx1P82976 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.78■□□□□ 0.76
Gbx1P82976 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.78■□□□□ 0.76
Gbx1P82976 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Gbx1P82976 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gbx1P82976 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gbx1P82976 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gbx1P82976 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gbx1P82976 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gbx1P82976 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.77■□□□□ 0.76
Gbx1P82976 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.77■□□□□ 0.76
Gbx1P82976 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gbx1P82976 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gbx1P82976 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gbx1P82976 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gbx1P82976 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Gbx1P82976 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Gbx1P82976 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Gbx1P82976 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gbx1P82976 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gbx1P82976 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gbx1P82976 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gbx1P82976 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gbx1P82976 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.76■□□□□ 0.75
Gbx1P82976 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gbx1P82976 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Gbx1P82976 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Gbx1P82976 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Gbx1P82976 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gbx1P82976 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gbx1P82976 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gbx1P82976 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gbx1P82976 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.75■□□□□ 0.75
Gbx1P82976 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gbx1P82976 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Gbx1P82976 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms