Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ldb1P70662 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ldb1P70662 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ldb1P70662 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ldb1P70662 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ldb1P70662 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
Ldb1P70662 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ldb1P70662 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ldb1P70662 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Ldb1P70662 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ldb1P70662 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ldb1P70662 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Ldb1P70662 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ldb1P70662 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.08■□□□□ 0.97
Ldb1P70662 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.08■□□□□ 0.97
Ldb1P70662 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ldb1P70662 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ldb1P70662 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Ldb1P70662 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ldb1P70662 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.06■□□□□ 0.96
Ldb1P70662 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ldb1P70662 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ldb1P70662 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ldb1P70662 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Ldb1P70662 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Ldb1P70662 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ldb1P70662 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ldb1P70662 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.05■□□□□ 0.96
Ldb1P70662 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ldb1P70662 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.05■□□□□ 0.96
Ldb1P70662 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ldb1P70662 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ldb1P70662 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ldb1P70662 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.04■□□□□ 0.96
Ldb1P70662 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ldb1P70662 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.04■□□□□ 0.96
Ldb1P70662 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ldb1P70662 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ldb1P70662 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ldb1P70662 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.04■□□□□ 0.96
Ldb1P70662 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ldb1P70662 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ldb1P70662 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Ldb1P70662 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.03■□□□□ 0.96
Ldb1P70662 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.03■□□□□ 0.96
Ldb1P70662 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ldb1P70662 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ldb1P70662 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ldb1P70662 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ldb1P70662 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ldb1P70662 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ldb1P70662 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.02■□□□□ 0.96
Ldb1P70662 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Ldb1P70662 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.02■□□□□ 0.96
Ldb1P70662 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.02■□□□□ 0.96
Ldb1P70662 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.02■□□□□ 0.96
Ldb1P70662 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.02■□□□□ 0.96
Ldb1P70662 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ldb1P70662 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ldb1P70662 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Ldb1P70662 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ldb1P70662 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.01■□□□□ 0.95
Ldb1P70662 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Ldb1P70662 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.01■□□□□ 0.95
Ldb1P70662 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ldb1P70662 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21■□□□□ 0.95
Ldb1P70662 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21■□□□□ 0.95
Ldb1P70662 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ldb1P70662 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Ldb1P70662 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ldb1P70662 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ldb1P70662 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ldb1P70662 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ldb1P70662 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ldb1P70662 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ldb1P70662 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ldb1P70662 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ldb1P70662 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ldb1P70662 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ldb1P70662 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ldb1P70662 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ldb1P70662 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ldb1P70662 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Ldb1P70662 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
Ldb1P70662 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ldb1P70662 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.98■□□□□ 0.95
Ldb1P70662 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ldb1P70662 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ldb1P70662 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ldb1P70662 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.97■□□□□ 0.95
Ldb1P70662 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ldb1P70662 Gm13238-201ENSMUST00000117655 780 ntBASIC20.97■□□□□ 0.95
Ldb1P70662 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.97■□□□□ 0.95
Ldb1P70662 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.97■□□□□ 0.95
Ldb1P70662 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ldb1P70662 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.96■□□□□ 0.95
Ldb1P70662 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.96■□□□□ 0.95
Ldb1P70662 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ldb1P70662 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Ldb1P70662 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms