Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Six5P70178 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Six5P70178 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.81■□□□□ 0.76
Six5P70178 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Six5P70178 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.8■□□□□ 0.76
Six5P70178 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Six5P70178 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Six5P70178 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Six5P70178 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.8■□□□□ 0.76
Six5P70178 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Six5P70178 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Six5P70178 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Six5P70178 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Six5P70178 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Six5P70178 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Six5P70178 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Six5P70178 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Six5P70178 Gm13238-201ENSMUST00000117655 780 ntBASIC19.79■□□□□ 0.76
Six5P70178 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Six5P70178 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.79■□□□□ 0.76
Six5P70178 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.79■□□□□ 0.76
Six5P70178 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Six5P70178 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.79■□□□□ 0.76
Six5P70178 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Six5P70178 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Six5P70178 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Six5P70178 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.79■□□□□ 0.76
Six5P70178 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Six5P70178 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Six5P70178 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Six5P70178 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.78■□□□□ 0.76
Six5P70178 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.78■□□□□ 0.76
Six5P70178 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Six5P70178 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Six5P70178 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Six5P70178 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six5P70178 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six5P70178 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six5P70178 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six5P70178 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Six5P70178 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Six5P70178 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.76■□□□□ 0.75
Six5P70178 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
Six5P70178 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six5P70178 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six5P70178 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.75■□□□□ 0.75
Six5P70178 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.75■□□□□ 0.75
Six5P70178 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Six5P70178 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
Six5P70178 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.75■□□□□ 0.75
Six5P70178 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Six5P70178 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Six5P70178 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Six5P70178 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Six5P70178 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Six5P70178 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Six5P70178 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Six5P70178 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Six5P70178 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Six5P70178 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.73■□□□□ 0.75
Six5P70178 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six5P70178 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six5P70178 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six5P70178 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six5P70178 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six5P70178 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six5P70178 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Six5P70178 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Six5P70178 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Six5P70178 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.72■□□□□ 0.75
Six5P70178 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Six5P70178 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Six5P70178 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.72■□□□□ 0.75
Six5P70178 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.72■□□□□ 0.75
Six5P70178 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Six5P70178 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.72■□□□□ 0.75
Six5P70178 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Six5P70178 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Six5P70178 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Six5P70178 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Six5P70178 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Six5P70178 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Six5P70178 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Six5P70178 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Six5P70178 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Six5P70178 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Six5P70178 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.71■□□□□ 0.75
Six5P70178 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Six5P70178 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.71■□□□□ 0.75
Six5P70178 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.71■□□□□ 0.75
Six5P70178 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Six5P70178 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Six5P70178 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Six5P70178 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Six5P70178 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Six5P70178 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.7■□□□□ 0.74
Six5P70178 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Six5P70178 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Six5P70178 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Six5P70178 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms