Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ybx1P62960 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.89■■□□□ 1.09
Ybx1P62960 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.89■■□□□ 1.09
Ybx1P62960 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ybx1P62960 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Ybx1P62960 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Ybx1P62960 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.88■■□□□ 1.09
Ybx1P62960 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ybx1P62960 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ybx1P62960 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ybx1P62960 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ybx1P62960 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.87■■□□□ 1.09
Ybx1P62960 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ybx1P62960 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ybx1P62960 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.87■■□□□ 1.09
Ybx1P62960 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ybx1P62960 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ybx1P62960 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ybx1P62960 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Ybx1P62960 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ybx1P62960 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ybx1P62960 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Ybx1P62960 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ybx1P62960 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ybx1P62960 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ybx1P62960 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ybx1P62960 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.86■■□□□ 1.09
Ybx1P62960 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ybx1P62960 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.86■■□□□ 1.09
Ybx1P62960 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ybx1P62960 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ybx1P62960 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ybx1P62960 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.85■■□□□ 1.09
Ybx1P62960 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Ybx1P62960 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Ybx1P62960 Gm27454-201ENSMUST00000185090 204 ntBASIC21.84■■□□□ 1.09
Ybx1P62960 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ybx1P62960 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ybx1P62960 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ybx1P62960 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ybx1P62960 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.84■■□□□ 1.09
Ybx1P62960 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ybx1P62960 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Ybx1P62960 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ybx1P62960 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Ybx1P62960 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ybx1P62960 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ybx1P62960 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.82■■□□□ 1.08
Ybx1P62960 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ybx1P62960 Golgb1-201ENSMUST00000023534 498 ntBASIC21.82■■□□□ 1.08
Ybx1P62960 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ybx1P62960 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
Ybx1P62960 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ybx1P62960 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ybx1P62960 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Ybx1P62960 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ybx1P62960 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.81■■□□□ 1.08
Ybx1P62960 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ybx1P62960 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Ybx1P62960 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ybx1P62960 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ybx1P62960 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.8■■□□□ 1.08
Ybx1P62960 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ybx1P62960 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.8■■□□□ 1.08
Ybx1P62960 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.8■■□□□ 1.08
Ybx1P62960 Gm45417-201ENSMUST00000209533 758 ntBASIC21.8■■□□□ 1.08
Ybx1P62960 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.8■■□□□ 1.08
Ybx1P62960 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ybx1P62960 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ybx1P62960 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ybx1P62960 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ybx1P62960 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ybx1P62960 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ybx1P62960 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.79■■□□□ 1.08
Ybx1P62960 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.79■■□□□ 1.08
Ybx1P62960 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ybx1P62960 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ybx1P62960 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ybx1P62960 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ybx1P62960 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.78■■□□□ 1.08
Ybx1P62960 Serp2-204ENSMUST00000228055 705 ntBASIC21.78■■□□□ 1.08
Ybx1P62960 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ybx1P62960 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.78■■□□□ 1.08
Ybx1P62960 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ybx1P62960 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ybx1P62960 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.77■■□□□ 1.08
Ybx1P62960 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ybx1P62960 Gm12821-201ENSMUST00000120022 600 ntBASIC21.77■■□□□ 1.08
Ybx1P62960 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ybx1P62960 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.77■■□□□ 1.08
Ybx1P62960 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ybx1P62960 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ybx1P62960 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.76■■□□□ 1.07
Ybx1P62960 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ybx1P62960 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ybx1P62960 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ybx1P62960 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ybx1P62960 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.76■■□□□ 1.07
Ybx1P62960 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ybx1P62960 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms