Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.06■□□□□ 0.96
Fdft1P53798 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Fdft1P53798 Cap2-205ENSMUST00000225824 1634 ntBASIC21.06■□□□□ 0.96
Fdft1P53798 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Fdft1P53798 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Fdft1P53798 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fdft1P53798 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fdft1P53798 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
Fdft1P53798 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.05■□□□□ 0.96
Fdft1P53798 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Fdft1P53798 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fdft1P53798 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Fdft1P53798 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fdft1P53798 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Fdft1P53798 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fdft1P53798 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Fdft1P53798 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Fdft1P53798 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Fdft1P53798 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Fdft1P53798 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Fdft1P53798 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.04■□□□□ 0.96
Fdft1P53798 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fdft1P53798 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.03■□□□□ 0.96
Fdft1P53798 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.03■□□□□ 0.96
Fdft1P53798 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fdft1P53798 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Fdft1P53798 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fdft1P53798 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fdft1P53798 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Fdft1P53798 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Fdft1P53798 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.02■□□□□ 0.96
Fdft1P53798 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.02■□□□□ 0.96
Fdft1P53798 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.02■□□□□ 0.96
Fdft1P53798 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Fdft1P53798 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Fdft1P53798 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.01■□□□□ 0.95
Fdft1P53798 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fdft1P53798 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Fdft1P53798 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fdft1P53798 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Fdft1P53798 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Fdft1P53798 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
Fdft1P53798 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Fdft1P53798 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21■□□□□ 0.95
Fdft1P53798 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Fdft1P53798 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Fdft1P53798 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Fdft1P53798 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21■□□□□ 0.95
Fdft1P53798 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21■□□□□ 0.95
Fdft1P53798 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Fdft1P53798 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Fdft1P53798 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.99■□□□□ 0.95
Fdft1P53798 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.99■□□□□ 0.95
Fdft1P53798 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Fdft1P53798 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Fdft1P53798 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Fdft1P53798 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Fdft1P53798 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Fdft1P53798 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Fdft1P53798 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.98■□□□□ 0.95
Fdft1P53798 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fdft1P53798 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fdft1P53798 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fdft1P53798 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fdft1P53798 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Fdft1P53798 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Fdft1P53798 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fdft1P53798 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Fdft1P53798 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Fdft1P53798 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Fdft1P53798 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fdft1P53798 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fdft1P53798 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fdft1P53798 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.96■□□□□ 0.95
Fdft1P53798 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Fdft1P53798 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.96■□□□□ 0.95
Fdft1P53798 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Fdft1P53798 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Fdft1P53798 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Fdft1P53798 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Fdft1P53798 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Fdft1P53798 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Fdft1P53798 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Fdft1P53798 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
Fdft1P53798 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Fdft1P53798 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Fdft1P53798 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Fdft1P53798 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
Fdft1P53798 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Fdft1P53798 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Fdft1P53798 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.94■□□□□ 0.94
Fdft1P53798 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fdft1P53798 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Fdft1P53798 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Fdft1P53798 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fdft1P53798 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fdft1P53798 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Fdft1P53798 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Fdft1P53798 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.93■□□□□ 0.94
Fdft1P53798 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms