Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Pdx1P52946 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pdx1P52946 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Pdx1P52946 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pdx1P52946 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pdx1P52946 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pdx1P52946 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pdx1P52946 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pdx1P52946 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Pdx1P52946 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.99■□□□□ 0.95
Pdx1P52946 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pdx1P52946 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pdx1P52946 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pdx1P52946 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Pdx1P52946 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pdx1P52946 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pdx1P52946 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pdx1P52946 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.98■□□□□ 0.95
Pdx1P52946 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.98■□□□□ 0.95
Pdx1P52946 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
Pdx1P52946 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pdx1P52946 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pdx1P52946 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.97■□□□□ 0.95
Pdx1P52946 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Pdx1P52946 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pdx1P52946 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.97■□□□□ 0.95
Pdx1P52946 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pdx1P52946 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Pdx1P52946 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pdx1P52946 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pdx1P52946 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pdx1P52946 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pdx1P52946 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pdx1P52946 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.96■□□□□ 0.95
Pdx1P52946 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.96■□□□□ 0.95
Pdx1P52946 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Pdx1P52946 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pdx1P52946 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.96■□□□□ 0.95
Pdx1P52946 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pdx1P52946 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pdx1P52946 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pdx1P52946 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pdx1P52946 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Pdx1P52946 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pdx1P52946 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pdx1P52946 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.95■□□□□ 0.94
Pdx1P52946 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.95■□□□□ 0.94
Pdx1P52946 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pdx1P52946 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pdx1P52946 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Pdx1P52946 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pdx1P52946 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pdx1P52946 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pdx1P52946 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
Pdx1P52946 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Pdx1P52946 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pdx1P52946 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.94■□□□□ 0.94
Pdx1P52946 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.94■□□□□ 0.94
Pdx1P52946 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pdx1P52946 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.93■□□□□ 0.94
Pdx1P52946 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pdx1P52946 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pdx1P52946 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Pdx1P52946 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pdx1P52946 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Pdx1P52946 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.92■□□□□ 0.94
Pdx1P52946 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.92■□□□□ 0.94
Pdx1P52946 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Pdx1P52946 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.92■□□□□ 0.94
Pdx1P52946 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pdx1P52946 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.92■□□□□ 0.94
Pdx1P52946 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Pdx1P52946 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pdx1P52946 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
Pdx1P52946 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Pdx1P52946 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.91■□□□□ 0.94
Pdx1P52946 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pdx1P52946 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pdx1P52946 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pdx1P52946 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pdx1P52946 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pdx1P52946 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pdx1P52946 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pdx1P52946 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pdx1P52946 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pdx1P52946 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pdx1P52946 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Pdx1P52946 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pdx1P52946 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pdx1P52946 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pdx1P52946 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pdx1P52946 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pdx1P52946 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Pdx1P52946 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Pdx1P52946 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.89■□□□□ 0.93
Pdx1P52946 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pdx1P52946 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.88■□□□□ 0.93
Pdx1P52946 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Pdx1P52946 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pdx1P52946 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms