Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.47■□□□□ 0.39
Nkx2-1P50220 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-1P50220 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.47■□□□□ 0.39
Nkx2-1P50220 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-1P50220 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-1P50220 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-1P50220 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Nkx2-1P50220 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.46■□□□□ 0.39
Nkx2-1P50220 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-1P50220 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
Nkx2-1P50220 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Nkx2-1P50220 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Nkx2-1P50220 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-1P50220 Terc-201ENSMUST00000082862 423 ntBASIC17.45■□□□□ 0.38
Nkx2-1P50220 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-1P50220 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-1P50220 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.45■□□□□ 0.38
Nkx2-1P50220 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.45■□□□□ 0.38
Nkx2-1P50220 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-1P50220 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-1P50220 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-1P50220 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-1P50220 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-1P50220 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Nkx2-1P50220 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Nkx2-1P50220 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-1P50220 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-1P50220 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-1P50220 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Nkx2-1P50220 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.43■□□□□ 0.38
Nkx2-1P50220 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-1P50220 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-1P50220 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-1P50220 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-1P50220 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-1P50220 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-1P50220 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-1P50220 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-1P50220 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-1P50220 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
Nkx2-1P50220 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Nkx2-1P50220 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-1P50220 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-1P50220 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-1P50220 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.41■□□□□ 0.38
Nkx2-1P50220 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-1P50220 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-1P50220 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-1P50220 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-1P50220 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-1P50220 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Nkx2-1P50220 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-1P50220 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Nkx2-1P50220 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-1P50220 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-1P50220 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-1P50220 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-1P50220 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-1P50220 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-1P50220 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.41■□□□□ 0.38
Nkx2-1P50220 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-1P50220 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.4■□□□□ 0.38
Nkx2-1P50220 Mir3960-201ENSMUST00000198213 73 ntBASIC17.4■□□□□ 0.38
Nkx2-1P50220 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.4■□□□□ 0.38
Nkx2-1P50220 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-1P50220 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nkx2-1P50220 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Nkx2-1P50220 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx2-1P50220 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-1P50220 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Nkx2-1P50220 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.38■□□□□ 0.37
Nkx2-1P50220 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-1P50220 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Nkx2-1P50220 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-1P50220 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-1P50220 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-1P50220 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-1P50220 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-1P50220 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-1P50220 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-1P50220 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-1P50220 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-1P50220 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-1P50220 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-1P50220 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Nkx2-1P50220 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-1P50220 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-1P50220 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Nkx2-1P50220 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-1P50220 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-1P50220 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-1P50220 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-1P50220 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Nkx2-1P50220 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Nkx2-1P50220 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-1P50220 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-1P50220 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Nkx2-1P50220 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Nkx2-1P50220 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-1P50220 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms