Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hnf4aP49698 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.47■□□□□ 0.87
Hnf4aP49698 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.47■□□□□ 0.87
Hnf4aP49698 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Hnf4aP49698 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Hnf4aP49698 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.47■□□□□ 0.87
Hnf4aP49698 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hnf4aP49698 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Hnf4aP49698 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Hnf4aP49698 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hnf4aP49698 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hnf4aP49698 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hnf4aP49698 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hnf4aP49698 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hnf4aP49698 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hnf4aP49698 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hnf4aP49698 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Hnf4aP49698 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hnf4aP49698 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hnf4aP49698 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.45■□□□□ 0.86
Hnf4aP49698 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Hnf4aP49698 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hnf4aP49698 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hnf4aP49698 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hnf4aP49698 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hnf4aP49698 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Hnf4aP49698 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hnf4aP49698 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hnf4aP49698 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hnf4aP49698 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.44■□□□□ 0.86
Hnf4aP49698 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hnf4aP49698 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Hnf4aP49698 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hnf4aP49698 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hnf4aP49698 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hnf4aP49698 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hnf4aP49698 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hnf4aP49698 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hnf4aP49698 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hnf4aP49698 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hnf4aP49698 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hnf4aP49698 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hnf4aP49698 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Hnf4aP49698 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hnf4aP49698 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hnf4aP49698 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Hnf4aP49698 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Hnf4aP49698 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.42■□□□□ 0.86
Hnf4aP49698 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hnf4aP49698 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hnf4aP49698 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.41■□□□□ 0.86
Hnf4aP49698 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.41■□□□□ 0.86
Hnf4aP49698 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hnf4aP49698 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hnf4aP49698 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hnf4aP49698 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Hnf4aP49698 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hnf4aP49698 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hnf4aP49698 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Hnf4aP49698 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Hnf4aP49698 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.4■□□□□ 0.86
Hnf4aP49698 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hnf4aP49698 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hnf4aP49698 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hnf4aP49698 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hnf4aP49698 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hnf4aP49698 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hnf4aP49698 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hnf4aP49698 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Hnf4aP49698 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hnf4aP49698 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.39■□□□□ 0.85
Hnf4aP49698 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hnf4aP49698 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.38■□□□□ 0.85
Hnf4aP49698 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hnf4aP49698 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hnf4aP49698 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hnf4aP49698 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hnf4aP49698 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hnf4aP49698 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hnf4aP49698 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.37■□□□□ 0.85
Hnf4aP49698 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hnf4aP49698 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hnf4aP49698 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hnf4aP49698 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hnf4aP49698 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hnf4aP49698 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hnf4aP49698 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hnf4aP49698 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hnf4aP49698 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hnf4aP49698 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.36■□□□□ 0.85
Hnf4aP49698 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Hnf4aP49698 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hnf4aP49698 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hnf4aP49698 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hnf4aP49698 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hnf4aP49698 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.36■□□□□ 0.85
Hnf4aP49698 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hnf4aP49698 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.35■□□□□ 0.85
Hnf4aP49698 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hnf4aP49698 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms