Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RxrbP28704 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RxrbP28704 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
RxrbP28704 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.31■■□□□ 1
RxrbP28704 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RxrbP28704 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.31■■□□□ 1
RxrbP28704 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RxrbP28704 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RxrbP28704 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
RxrbP28704 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RxrbP28704 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RxrbP28704 Iqck-206ENSMUST00000208658 2891 ntBASIC21.3■■□□□ 1
RxrbP28704 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RxrbP28704 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.3■■□□□ 1
RxrbP28704 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RxrbP28704 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RxrbP28704 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.3■■□□□ 1
RxrbP28704 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.3■■□□□ 1
RxrbP28704 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.3■■□□□ 1
RxrbP28704 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RxrbP28704 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RxrbP28704 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.29■■□□□ 1
RxrbP28704 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
RxrbP28704 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RxrbP28704 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RxrbP28704 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.29■■□□□ 1
RxrbP28704 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.28■■□□□ 1
RxrbP28704 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.28■■□□□ 1
RxrbP28704 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RxrbP28704 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
RxrbP28704 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.27■■□□□ 1
RxrbP28704 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RxrbP28704 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.27■■□□□ 1
RxrbP28704 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
RxrbP28704 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
RxrbP28704 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
RxrbP28704 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RxrbP28704 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RxrbP28704 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RxrbP28704 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RxrbP28704 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RxrbP28704 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RxrbP28704 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RxrbP28704 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
RxrbP28704 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RxrbP28704 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RxrbP28704 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RxrbP28704 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RxrbP28704 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RxrbP28704 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RxrbP28704 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RxrbP28704 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RxrbP28704 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RxrbP28704 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RxrbP28704 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RxrbP28704 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.23■□□□□ 0.99
RxrbP28704 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RxrbP28704 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RxrbP28704 Golph3-202ENSMUST00000226517 2359 ntBASIC21.23■□□□□ 0.99
RxrbP28704 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RxrbP28704 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RxrbP28704 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RxrbP28704 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RxrbP28704 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RxrbP28704 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
RxrbP28704 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RxrbP28704 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.22■□□□□ 0.99
RxrbP28704 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.22■□□□□ 0.99
RxrbP28704 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RxrbP28704 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RxrbP28704 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RxrbP28704 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RxrbP28704 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RxrbP28704 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.21■□□□□ 0.99
RxrbP28704 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RxrbP28704 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RxrbP28704 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RxrbP28704 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RxrbP28704 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RxrbP28704 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
RxrbP28704 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
RxrbP28704 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RxrbP28704 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RxrbP28704 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RxrbP28704 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
RxrbP28704 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RxrbP28704 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.2■□□□□ 0.98
RxrbP28704 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RxrbP28704 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
RxrbP28704 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RxrbP28704 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RxrbP28704 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RxrbP28704 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RxrbP28704 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.19■□□□□ 0.98
RxrbP28704 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.19■□□□□ 0.98
RxrbP28704 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RxrbP28704 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RxrbP28704 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RxrbP28704 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RxrbP28704 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms