Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.8■□□□□ 0.76
TP20293 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TP20293 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.8■□□□□ 0.76
TP20293 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TP20293 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TP20293 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TP20293 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TP20293 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TP20293 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TP20293 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TP20293 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TP20293 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TP20293 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TP20293 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TP20293 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TP20293 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TP20293 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TP20293 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TP20293 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TP20293 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TP20293 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TP20293 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TP20293 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TP20293 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TP20293 Gm45444-201ENSMUST00000211394 898 ntBASIC19.78■□□□□ 0.76
TP20293 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TP20293 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TP20293 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TP20293 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TP20293 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TP20293 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TP20293 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TP20293 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
TP20293 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TP20293 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
TP20293 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TP20293 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.77■□□□□ 0.76
TP20293 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.77■□□□□ 0.76
TP20293 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
TP20293 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TP20293 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TP20293 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
TP20293 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TP20293 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.76■□□□□ 0.75
TP20293 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TP20293 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TP20293 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TP20293 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.76■□□□□ 0.75
TP20293 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
TP20293 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TP20293 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TP20293 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TP20293 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TP20293 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TP20293 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TP20293 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TP20293 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TP20293 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TP20293 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TP20293 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TP20293 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TP20293 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TP20293 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.74■□□□□ 0.75
TP20293 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TP20293 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TP20293 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TP20293 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TP20293 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TP20293 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TP20293 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
TP20293 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TP20293 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TP20293 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TP20293 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TP20293 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TP20293 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TP20293 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TP20293 Gm43566-201ENSMUST00000196851 808 ntBASIC19.73■□□□□ 0.75
TP20293 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TP20293 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TP20293 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TP20293 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.72■□□□□ 0.75
TP20293 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TP20293 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TP20293 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.72■□□□□ 0.75
TP20293 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.72■□□□□ 0.75
TP20293 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TP20293 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.71■□□□□ 0.75
TP20293 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TP20293 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TP20293 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.71■□□□□ 0.75
TP20293 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TP20293 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TP20293 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TP20293 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TP20293 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TP20293 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TP20293 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TP20293 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TP20293 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 225.6 ms