Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TcraP01849 Iqck-206ENSMUST00000208658 2891 ntBASIC15.34■□□□□ 0.05
TcraP01849 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TcraP01849 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TcraP01849 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TcraP01849 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TcraP01849 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TcraP01849 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TcraP01849 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TcraP01849 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TcraP01849 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.33■□□□□ 0.04
TcraP01849 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TcraP01849 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TcraP01849 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TcraP01849 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TcraP01849 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TcraP01849 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
TcraP01849 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TcraP01849 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
TcraP01849 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TcraP01849 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TcraP01849 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TcraP01849 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TcraP01849 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TcraP01849 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TcraP01849 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TcraP01849 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TcraP01849 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TcraP01849 Gm8503-201ENSMUST00000118131 455 ntBASIC15.31■□□□□ 0.04
TcraP01849 Gm37136-201ENSMUST00000194368 194 ntBASIC15.31■□□□□ 0.04
TcraP01849 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TcraP01849 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TcraP01849 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC15.31■□□□□ 0.04
TcraP01849 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TcraP01849 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TcraP01849 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TcraP01849 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC15.3■□□□□ 0.04
TcraP01849 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TcraP01849 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC15.3■□□□□ 0.04
TcraP01849 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TcraP01849 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TcraP01849 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TcraP01849 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TcraP01849 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TcraP01849 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TcraP01849 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TcraP01849 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TcraP01849 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TcraP01849 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TcraP01849 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TcraP01849 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TcraP01849 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TcraP01849 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
TcraP01849 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TcraP01849 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TcraP01849 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TcraP01849 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TcraP01849 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
TcraP01849 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TcraP01849 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC15.28■□□□□ 0.04
TcraP01849 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TcraP01849 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TcraP01849 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TcraP01849 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TcraP01849 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TcraP01849 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TcraP01849 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
TcraP01849 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.27■□□□□ 0.04
TcraP01849 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TcraP01849 Gm22567-201ENSMUST00000175542 342 ntBASIC15.27■□□□□ 0.04
TcraP01849 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
TcraP01849 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TcraP01849 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TcraP01849 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TcraP01849 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TcraP01849 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TcraP01849 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TcraP01849 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TcraP01849 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TcraP01849 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.26■□□□□ 0.03
TcraP01849 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TcraP01849 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TcraP01849 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TcraP01849 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TcraP01849 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TcraP01849 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TcraP01849 AC131739.1-201ENSMUST00000221692 1245 ntBASIC15.25■□□□□ 0.03
TcraP01849 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TcraP01849 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TcraP01849 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TcraP01849 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TcraP01849 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TcraP01849 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TcraP01849 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC15.24■□□□□ 0.03
TcraP01849 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TcraP01849 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TcraP01849 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TcraP01849 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TcraP01849 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TcraP01849 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms