Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Igh-VJ558P01758 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Igh-VJ558P01758 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Igh-VJ558P01758 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Igh-VJ558P01758 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.41■□□□□ 0.54
Igh-VJ558P01758 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Igh-VJ558P01758 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Igh-VJ558P01758 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igh-VJ558P01758 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Igh-VJ558P01758 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igh-VJ558P01758 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igh-VJ558P01758 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.4■□□□□ 0.54
Igh-VJ558P01758 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.4■□□□□ 0.54
Igh-VJ558P01758 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igh-VJ558P01758 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igh-VJ558P01758 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Igh-VJ558P01758 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igh-VJ558P01758 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.4■□□□□ 0.54
Igh-VJ558P01758 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.4■□□□□ 0.54
Igh-VJ558P01758 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Igh-VJ558P01758 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Igh-VJ558P01758 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Igh-VJ558P01758 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.39■□□□□ 0.53
Igh-VJ558P01758 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Igh-VJ558P01758 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Igh-VJ558P01758 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Igh-VJ558P01758 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Igh-VJ558P01758 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Igh-VJ558P01758 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Igh-VJ558P01758 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Igh-VJ558P01758 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Igh-VJ558P01758 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Igh-VJ558P01758 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Igh-VJ558P01758 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.38■□□□□ 0.53
Igh-VJ558P01758 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Igh-VJ558P01758 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Igh-VJ558P01758 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Igh-VJ558P01758 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.37■□□□□ 0.53
Igh-VJ558P01758 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Igh-VJ558P01758 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Igh-VJ558P01758 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.37■□□□□ 0.53
Igh-VJ558P01758 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Igh-VJ558P01758 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Igh-VJ558P01758 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Igh-VJ558P01758 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Igh-VJ558P01758 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Igh-VJ558P01758 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.36■□□□□ 0.53
Igh-VJ558P01758 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Igh-VJ558P01758 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Igh-VJ558P01758 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Igh-VJ558P01758 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Igh-VJ558P01758 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Igh-VJ558P01758 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Igh-VJ558P01758 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.35■□□□□ 0.53
Igh-VJ558P01758 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Igh-VJ558P01758 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Igh-VJ558P01758 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.35■□□□□ 0.53
Igh-VJ558P01758 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Igh-VJ558P01758 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.35■□□□□ 0.53
Igh-VJ558P01758 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Igh-VJ558P01758 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Igh-VJ558P01758 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Igh-VJ558P01758 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Igh-VJ558P01758 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Igh-VJ558P01758 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Igh-VJ558P01758 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Igh-VJ558P01758 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Igh-VJ558P01758 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Igh-VJ558P01758 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Igh-VJ558P01758 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
Igh-VJ558P01758 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Igh-VJ558P01758 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
Igh-VJ558P01758 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Igh-VJ558P01758 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Igh-VJ558P01758 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Igh-VJ558P01758 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Igh-VJ558P01758 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.32■□□□□ 0.52
Igh-VJ558P01758 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Igh-VJ558P01758 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Igh-VJ558P01758 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Igh-VJ558P01758 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Igh-VJ558P01758 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Igh-VJ558P01758 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Igh-VJ558P01758 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Igh-VJ558P01758 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.31■□□□□ 0.52
Igh-VJ558P01758 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Igh-VJ558P01758 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Igh-VJ558P01758 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.31■□□□□ 0.52
Igh-VJ558P01758 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Igh-VJ558P01758 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.31■□□□□ 0.52
Igh-VJ558P01758 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Igh-VJ558P01758 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.31■□□□□ 0.52
Igh-VJ558P01758 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Igh-VJ558P01758 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Igh-VJ558P01758 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Igh-VJ558P01758 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Igh-VJ558P01758 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igh-VJ558P01758 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Igh-VJ558P01758 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igh-VJ558P01758 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms