Protein–RNA interactions for Protein: O70576

Stag3, Cohesin subunit SA-3, mousemouse

Predictions only

Length 1,240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag3O70576 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC29.38■■■□□ 2.29
Stag3O70576 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Stag3O70576 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Stag3O70576 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Stag3O70576 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Stag3O70576 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC29.37■■■□□ 2.29
Stag3O70576 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Stag3O70576 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Stag3O70576 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC29.36■■■□□ 2.29
Stag3O70576 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Stag3O70576 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
Stag3O70576 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC29.36■■■□□ 2.29
Stag3O70576 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Stag3O70576 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Stag3O70576 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC29.35■■■□□ 2.29
Stag3O70576 Golgb1-201ENSMUST00000023534 498 ntBASIC29.35■■■□□ 2.29
Stag3O70576 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Stag3O70576 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Stag3O70576 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Stag3O70576 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Stag3O70576 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Stag3O70576 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC29.34■■■□□ 2.29
Stag3O70576 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Stag3O70576 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
Stag3O70576 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Stag3O70576 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Stag3O70576 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Stag3O70576 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC29.33■■■□□ 2.29
Stag3O70576 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Stag3O70576 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC29.33■■■□□ 2.29
Stag3O70576 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC29.33■■■□□ 2.29
Stag3O70576 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC29.33■■■□□ 2.29
Stag3O70576 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Stag3O70576 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC29.33■■■□□ 2.29
Stag3O70576 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Stag3O70576 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Stag3O70576 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
Stag3O70576 Appbp2os-202ENSMUST00000206972 447 ntBASIC29.32■■■□□ 2.28
Stag3O70576 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Stag3O70576 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Stag3O70576 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
Stag3O70576 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
Stag3O70576 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Stag3O70576 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC29.31■■■□□ 2.28
Stag3O70576 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Stag3O70576 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC29.3■■■□□ 2.28
Stag3O70576 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Stag3O70576 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC29.3■■■□□ 2.28
Stag3O70576 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Stag3O70576 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC29.29■■■□□ 2.28
Stag3O70576 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Stag3O70576 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC29.29■■■□□ 2.28
Stag3O70576 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
Stag3O70576 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Stag3O70576 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Stag3O70576 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Stag3O70576 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC29.28■■■□□ 2.28
Stag3O70576 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
Stag3O70576 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC29.28■■■□□ 2.28
Stag3O70576 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Stag3O70576 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC29.27■■■□□ 2.28
Stag3O70576 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
Stag3O70576 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Stag3O70576 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC29.26■■■□□ 2.27
Stag3O70576 H3f3aos-201ENSMUST00000097448 2905 ntBASIC29.26■■■□□ 2.27
Stag3O70576 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Stag3O70576 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Stag3O70576 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC29.25■■■□□ 2.27
Stag3O70576 Gm12821-201ENSMUST00000120022 600 ntBASIC29.25■■■□□ 2.27
Stag3O70576 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC29.25■■■□□ 2.27
Stag3O70576 AC116713.1-201ENSMUST00000215074 430 ntBASIC29.25■■■□□ 2.27
Stag3O70576 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC29.25■■■□□ 2.27
Stag3O70576 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Stag3O70576 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Stag3O70576 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC29.24■■■□□ 2.27
Stag3O70576 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
Stag3O70576 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Stag3O70576 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Stag3O70576 Gm27454-201ENSMUST00000185090 204 ntBASIC29.24■■■□□ 2.27
Stag3O70576 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Stag3O70576 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Stag3O70576 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Stag3O70576 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Stag3O70576 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC29.23■■■□□ 2.27
Stag3O70576 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC29.23■■■□□ 2.27
Stag3O70576 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC29.22■■■□□ 2.27
Stag3O70576 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Stag3O70576 Il17rd-202ENSMUST00000223942 2186 ntBASIC29.22■■■□□ 2.27
Stag3O70576 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC29.22■■■□□ 2.27
Stag3O70576 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
Stag3O70576 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Stag3O70576 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Stag3O70576 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC29.21■■■□□ 2.27
Stag3O70576 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Stag3O70576 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC29.21■■■□□ 2.27
Stag3O70576 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC29.21■■■□□ 2.27
Stag3O70576 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Stag3O70576 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Stag3O70576 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC29.2■■■□□ 2.26
Stag3O70576 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC29.2■■■□□ 2.26
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms