Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pdlim1O70400 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pdlim1O70400 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pdlim1O70400 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pdlim1O70400 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pdlim1O70400 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pdlim1O70400 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pdlim1O70400 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Pdlim1O70400 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.96■□□□□ 0.95
Pdlim1O70400 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.96■□□□□ 0.95
Pdlim1O70400 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.96■□□□□ 0.95
Pdlim1O70400 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pdlim1O70400 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pdlim1O70400 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pdlim1O70400 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.96■□□□□ 0.95
Pdlim1O70400 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.95■□□□□ 0.94
Pdlim1O70400 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
Pdlim1O70400 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.95■□□□□ 0.94
Pdlim1O70400 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pdlim1O70400 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.94■□□□□ 0.94
Pdlim1O70400 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pdlim1O70400 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pdlim1O70400 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.94■□□□□ 0.94
Pdlim1O70400 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pdlim1O70400 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pdlim1O70400 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pdlim1O70400 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pdlim1O70400 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Pdlim1O70400 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pdlim1O70400 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.93■□□□□ 0.94
Pdlim1O70400 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.93■□□□□ 0.94
Pdlim1O70400 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pdlim1O70400 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pdlim1O70400 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pdlim1O70400 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pdlim1O70400 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pdlim1O70400 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pdlim1O70400 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pdlim1O70400 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pdlim1O70400 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pdlim1O70400 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Pdlim1O70400 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pdlim1O70400 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pdlim1O70400 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pdlim1O70400 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
Pdlim1O70400 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.91■□□□□ 0.94
Pdlim1O70400 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.91■□□□□ 0.94
Pdlim1O70400 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pdlim1O70400 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pdlim1O70400 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pdlim1O70400 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Pdlim1O70400 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pdlim1O70400 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pdlim1O70400 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pdlim1O70400 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pdlim1O70400 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pdlim1O70400 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pdlim1O70400 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.89■□□□□ 0.93
Pdlim1O70400 Gm15820-201ENSMUST00000201566 728 ntBASIC20.89■□□□□ 0.93
Pdlim1O70400 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.89■□□□□ 0.93
Pdlim1O70400 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Pdlim1O70400 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pdlim1O70400 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Pdlim1O70400 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pdlim1O70400 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pdlim1O70400 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pdlim1O70400 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pdlim1O70400 Gm10399-202ENSMUST00000202768 748 ntBASIC20.88■□□□□ 0.93
Pdlim1O70400 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pdlim1O70400 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pdlim1O70400 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pdlim1O70400 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pdlim1O70400 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.87■□□□□ 0.93
Pdlim1O70400 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pdlim1O70400 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.86■□□□□ 0.93
Pdlim1O70400 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Pdlim1O70400 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pdlim1O70400 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.86■□□□□ 0.93
Pdlim1O70400 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Pdlim1O70400 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.85■□□□□ 0.93
Pdlim1O70400 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pdlim1O70400 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pdlim1O70400 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Pdlim1O70400 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pdlim1O70400 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.85■□□□□ 0.93
Pdlim1O70400 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pdlim1O70400 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pdlim1O70400 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.85■□□□□ 0.93
Pdlim1O70400 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.85■□□□□ 0.93
Pdlim1O70400 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pdlim1O70400 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pdlim1O70400 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pdlim1O70400 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Pdlim1O70400 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pdlim1O70400 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pdlim1O70400 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pdlim1O70400 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pdlim1O70400 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pdlim1O70400 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.84■□□□□ 0.93
Pdlim1O70400 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms