Protein–RNA interactions for Protein: O55241

Hcrt, Orexin, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HcrtO55241 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.22■□□□□ 0.99
HcrtO55241 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.22■□□□□ 0.99
HcrtO55241 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HcrtO55241 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HcrtO55241 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HcrtO55241 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HcrtO55241 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HcrtO55241 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HcrtO55241 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HcrtO55241 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HcrtO55241 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.2■□□□□ 0.98
HcrtO55241 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.2■□□□□ 0.98
HcrtO55241 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.2■□□□□ 0.98
HcrtO55241 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.2■□□□□ 0.98
HcrtO55241 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HcrtO55241 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HcrtO55241 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HcrtO55241 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HcrtO55241 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.19■□□□□ 0.98
HcrtO55241 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HcrtO55241 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
HcrtO55241 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
HcrtO55241 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.18■□□□□ 0.98
HcrtO55241 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HcrtO55241 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HcrtO55241 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
HcrtO55241 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HcrtO55241 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HcrtO55241 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HcrtO55241 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
HcrtO55241 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
HcrtO55241 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
HcrtO55241 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.17■□□□□ 0.98
HcrtO55241 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HcrtO55241 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HcrtO55241 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HcrtO55241 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HcrtO55241 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HcrtO55241 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HcrtO55241 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
HcrtO55241 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HcrtO55241 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HcrtO55241 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
HcrtO55241 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
HcrtO55241 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HcrtO55241 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HcrtO55241 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HcrtO55241 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
HcrtO55241 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HcrtO55241 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
HcrtO55241 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HcrtO55241 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HcrtO55241 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HcrtO55241 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
HcrtO55241 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.14■□□□□ 0.97
HcrtO55241 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.14■□□□□ 0.97
HcrtO55241 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HcrtO55241 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HcrtO55241 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HcrtO55241 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HcrtO55241 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HcrtO55241 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
HcrtO55241 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HcrtO55241 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HcrtO55241 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HcrtO55241 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HcrtO55241 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.13■□□□□ 0.97
HcrtO55241 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
HcrtO55241 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.12■□□□□ 0.97
HcrtO55241 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HcrtO55241 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
HcrtO55241 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HcrtO55241 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HcrtO55241 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HcrtO55241 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HcrtO55241 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HcrtO55241 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HcrtO55241 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HcrtO55241 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HcrtO55241 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HcrtO55241 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.11■□□□□ 0.97
HcrtO55241 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HcrtO55241 Gm45444-201ENSMUST00000211394 898 ntBASIC21.11■□□□□ 0.97
HcrtO55241 Gm5921-201ENSMUST00000075898 882 ntBASIC21.11■□□□□ 0.97
HcrtO55241 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HcrtO55241 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HcrtO55241 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
HcrtO55241 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HcrtO55241 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HcrtO55241 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.11■□□□□ 0.97
HcrtO55241 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HcrtO55241 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HcrtO55241 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HcrtO55241 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HcrtO55241 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
HcrtO55241 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.09■□□□□ 0.97
HcrtO55241 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
HcrtO55241 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
HcrtO55241 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HcrtO55241 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms