Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Cxcl13O55038 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cxcl13O55038 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
Cxcl13O55038 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cxcl13O55038 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cxcl13O55038 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cxcl13O55038 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cxcl13O55038 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cxcl13O55038 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18■□□□□ 0.47
Cxcl13O55038 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cxcl13O55038 AC116713.1-201ENSMUST00000215074 430 ntBASIC18■□□□□ 0.47
Cxcl13O55038 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18■□□□□ 0.47
Cxcl13O55038 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cxcl13O55038 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cxcl13O55038 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cxcl13O55038 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cxcl13O55038 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cxcl13O55038 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.99■□□□□ 0.47
Cxcl13O55038 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cxcl13O55038 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cxcl13O55038 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.99■□□□□ 0.47
Cxcl13O55038 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cxcl13O55038 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cxcl13O55038 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cxcl13O55038 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cxcl13O55038 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cxcl13O55038 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cxcl13O55038 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cxcl13O55038 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cxcl13O55038 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cxcl13O55038 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cxcl13O55038 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.97■□□□□ 0.47
Cxcl13O55038 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cxcl13O55038 Gm15039-201ENSMUST00000118914 875 ntBASIC17.97■□□□□ 0.47
Cxcl13O55038 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.97■□□□□ 0.47
Cxcl13O55038 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cxcl13O55038 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.97■□□□□ 0.47
Cxcl13O55038 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cxcl13O55038 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cxcl13O55038 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cxcl13O55038 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cxcl13O55038 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cxcl13O55038 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cxcl13O55038 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cxcl13O55038 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.96■□□□□ 0.47
Cxcl13O55038 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cxcl13O55038 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cxcl13O55038 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cxcl13O55038 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.46
Cxcl13O55038 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.95■□□□□ 0.46
Cxcl13O55038 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cxcl13O55038 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cxcl13O55038 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cxcl13O55038 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cxcl13O55038 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cxcl13O55038 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cxcl13O55038 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cxcl13O55038 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cxcl13O55038 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cxcl13O55038 Gm9847-201ENSMUST00000052528 599 ntBASIC17.95■□□□□ 0.46
Cxcl13O55038 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cxcl13O55038 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.95■□□□□ 0.46
Cxcl13O55038 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cxcl13O55038 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cxcl13O55038 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cxcl13O55038 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cxcl13O55038 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.94■□□□□ 0.46
Cxcl13O55038 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cxcl13O55038 Gm13241-201ENSMUST00000094493 780 ntBASIC17.94■□□□□ 0.46
Cxcl13O55038 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cxcl13O55038 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Cxcl13O55038 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cxcl13O55038 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.93■□□□□ 0.46
Cxcl13O55038 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.93■□□□□ 0.46
Cxcl13O55038 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cxcl13O55038 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cxcl13O55038 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cxcl13O55038 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cxcl13O55038 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cxcl13O55038 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cxcl13O55038 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cxcl13O55038 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cxcl13O55038 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.92■□□□□ 0.46
Cxcl13O55038 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.92■□□□□ 0.46
Cxcl13O55038 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cxcl13O55038 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cxcl13O55038 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.92■□□□□ 0.46
Cxcl13O55038 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.92■□□□□ 0.46
Cxcl13O55038 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.92■□□□□ 0.46
Cxcl13O55038 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cxcl13O55038 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cxcl13O55038 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cxcl13O55038 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cxcl13O55038 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cxcl13O55038 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.91■□□□□ 0.46
Cxcl13O55038 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cxcl13O55038 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cxcl13O55038 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cxcl13O55038 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cxcl13O55038 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms