Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prrt1O35449 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prrt1O35449 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.87■□□□□ 0.45
Prrt1O35449 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prrt1O35449 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prrt1O35449 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Prrt1O35449 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prrt1O35449 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Prrt1O35449 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prrt1O35449 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.86■□□□□ 0.45
Prrt1O35449 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prrt1O35449 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prrt1O35449 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Prrt1O35449 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prrt1O35449 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prrt1O35449 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Prrt1O35449 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Prrt1O35449 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prrt1O35449 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Prrt1O35449 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prrt1O35449 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Prrt1O35449 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Prrt1O35449 Gm4799-201ENSMUST00000095396 657 ntBASIC17.85■□□□□ 0.45
Prrt1O35449 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prrt1O35449 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Prrt1O35449 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prrt1O35449 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prrt1O35449 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prrt1O35449 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.84■□□□□ 0.45
Prrt1O35449 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.84■□□□□ 0.45
Prrt1O35449 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Prrt1O35449 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prrt1O35449 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Prrt1O35449 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prrt1O35449 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prrt1O35449 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Prrt1O35449 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Prrt1O35449 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.83■□□□□ 0.45
Prrt1O35449 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.83■□□□□ 0.44
Prrt1O35449 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prrt1O35449 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Prrt1O35449 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prrt1O35449 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prrt1O35449 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Prrt1O35449 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prrt1O35449 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prrt1O35449 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prrt1O35449 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC17.81■□□□□ 0.44
Prrt1O35449 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.81■□□□□ 0.44
Prrt1O35449 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prrt1O35449 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prrt1O35449 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Prrt1O35449 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Prrt1O35449 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Prrt1O35449 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prrt1O35449 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Prrt1O35449 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Prrt1O35449 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prrt1O35449 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Prrt1O35449 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Prrt1O35449 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.8■□□□□ 0.44
Prrt1O35449 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Prrt1O35449 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prrt1O35449 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prrt1O35449 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Prrt1O35449 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prrt1O35449 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Prrt1O35449 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prrt1O35449 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Prrt1O35449 Terc-201ENSMUST00000082862 423 ntBASIC17.79■□□□□ 0.44
Prrt1O35449 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prrt1O35449 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prrt1O35449 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prrt1O35449 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prrt1O35449 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prrt1O35449 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prrt1O35449 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prrt1O35449 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Prrt1O35449 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Prrt1O35449 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.78■□□□□ 0.44
Prrt1O35449 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.78■□□□□ 0.44
Prrt1O35449 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Prrt1O35449 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Prrt1O35449 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.78■□□□□ 0.44
Prrt1O35449 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.78■□□□□ 0.44
Prrt1O35449 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prrt1O35449 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prrt1O35449 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prrt1O35449 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prrt1O35449 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Prrt1O35449 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Prrt1O35449 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Prrt1O35449 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Prrt1O35449 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Prrt1O35449 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Prrt1O35449 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Prrt1O35449 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prrt1O35449 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Prrt1O35449 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prrt1O35449 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms