Protein–RNA interactions for Protein: O08738

Casp6, Caspase-6, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp6O08738 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Casp6O08738 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Casp6O08738 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Casp6O08738 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Casp6O08738 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Casp6O08738 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Casp6O08738 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.22■□□□□ 0.51
Casp6O08738 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.22■□□□□ 0.51
Casp6O08738 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.22■□□□□ 0.51
Casp6O08738 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.22■□□□□ 0.51
Casp6O08738 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Casp6O08738 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Casp6O08738 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Casp6O08738 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Casp6O08738 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Casp6O08738 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Casp6O08738 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Casp6O08738 Golgb1-201ENSMUST00000023534 498 ntBASIC18.21■□□□□ 0.51
Casp6O08738 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
Casp6O08738 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.21■□□□□ 0.51
Casp6O08738 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Casp6O08738 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.21■□□□□ 0.51
Casp6O08738 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.21■□□□□ 0.51
Casp6O08738 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Casp6O08738 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Casp6O08738 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Casp6O08738 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.2■□□□□ 0.5
Casp6O08738 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Casp6O08738 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.2■□□□□ 0.5
Casp6O08738 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Casp6O08738 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Casp6O08738 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Casp6O08738 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Casp6O08738 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.19■□□□□ 0.5
Casp6O08738 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Casp6O08738 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Casp6O08738 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Casp6O08738 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Casp6O08738 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Casp6O08738 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Casp6O08738 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Casp6O08738 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Casp6O08738 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Casp6O08738 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Casp6O08738 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Casp6O08738 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Casp6O08738 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Casp6O08738 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.18■□□□□ 0.5
Casp6O08738 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.18■□□□□ 0.5
Casp6O08738 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Casp6O08738 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Casp6O08738 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Casp6O08738 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Casp6O08738 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Casp6O08738 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Casp6O08738 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Casp6O08738 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Casp6O08738 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.17■□□□□ 0.5
Casp6O08738 Gm27454-201ENSMUST00000185090 204 ntBASIC18.17■□□□□ 0.5
Casp6O08738 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.17■□□□□ 0.5
Casp6O08738 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Casp6O08738 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Casp6O08738 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Casp6O08738 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Casp6O08738 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Casp6O08738 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Casp6O08738 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Casp6O08738 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Casp6O08738 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Casp6O08738 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Casp6O08738 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Casp6O08738 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.16■□□□□ 0.5
Casp6O08738 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.16■□□□□ 0.5
Casp6O08738 Serp2-204ENSMUST00000228055 705 ntBASIC18.16■□□□□ 0.5
Casp6O08738 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Casp6O08738 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Casp6O08738 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Casp6O08738 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Casp6O08738 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Casp6O08738 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Casp6O08738 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Casp6O08738 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Casp6O08738 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Casp6O08738 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Casp6O08738 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Casp6O08738 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Casp6O08738 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Casp6O08738 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Casp6O08738 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Casp6O08738 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Casp6O08738 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Casp6O08738 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Casp6O08738 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Casp6O08738 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.14■□□□□ 0.49
Casp6O08738 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Casp6O08738 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.14■□□□□ 0.49
Casp6O08738 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Casp6O08738 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Casp6O08738 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Casp6O08738 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms