Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav13d-3J3QMG8 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav13d-3J3QMG8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav13d-3J3QMG8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav13d-3J3QMG8 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav13d-3J3QMG8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trav13d-3J3QMG8 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.68■□□□□ 0.58
Trav13d-3J3QMG8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trav13d-3J3QMG8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trav13d-3J3QMG8 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Trav13d-3J3QMG8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Trav13d-3J3QMG8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav13d-3J3QMG8 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav13d-3J3QMG8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav13d-3J3QMG8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Trav13d-3J3QMG8 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav13d-3J3QMG8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.67■□□□□ 0.58
Trav13d-3J3QMG8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.67■□□□□ 0.58
Trav13d-3J3QMG8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.67■□□□□ 0.58
Trav13d-3J3QMG8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trav13d-3J3QMG8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trav13d-3J3QMG8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav13d-3J3QMG8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav13d-3J3QMG8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav13d-3J3QMG8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav13d-3J3QMG8 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav13d-3J3QMG8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav13d-3J3QMG8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.65■□□□□ 0.58
Trav13d-3J3QMG8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.58
Trav13d-3J3QMG8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav13d-3J3QMG8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.64■□□□□ 0.57
Trav13d-3J3QMG8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav13d-3J3QMG8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trav13d-3J3QMG8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav13d-3J3QMG8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Trav13d-3J3QMG8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.64■□□□□ 0.57
Trav13d-3J3QMG8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav13d-3J3QMG8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav13d-3J3QMG8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.63■□□□□ 0.57
Trav13d-3J3QMG8 Gm45444-201ENSMUST00000211394 898 ntBASIC18.63■□□□□ 0.57
Trav13d-3J3QMG8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav13d-3J3QMG8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav13d-3J3QMG8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav13d-3J3QMG8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav13d-3J3QMG8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trav13d-3J3QMG8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.63■□□□□ 0.57
Trav13d-3J3QMG8 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.62■□□□□ 0.57
Trav13d-3J3QMG8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav13d-3J3QMG8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav13d-3J3QMG8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.62■□□□□ 0.57
Trav13d-3J3QMG8 Gm5921-201ENSMUST00000075898 882 ntBASIC18.62■□□□□ 0.57
Trav13d-3J3QMG8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav13d-3J3QMG8 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.62■□□□□ 0.57
Trav13d-3J3QMG8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav13d-3J3QMG8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav13d-3J3QMG8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav13d-3J3QMG8 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.62■□□□□ 0.57
Trav13d-3J3QMG8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav13d-3J3QMG8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trav13d-3J3QMG8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
Trav13d-3J3QMG8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav13d-3J3QMG8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav13d-3J3QMG8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav13d-3J3QMG8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trav13d-3J3QMG8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Trav13d-3J3QMG8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.61■□□□□ 0.57
Trav13d-3J3QMG8 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav13d-3J3QMG8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trav13d-3J3QMG8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav13d-3J3QMG8 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trav13d-3J3QMG8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav13d-3J3QMG8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav13d-3J3QMG8 Gm13238-201ENSMUST00000117655 780 ntBASIC18.6■□□□□ 0.57
Trav13d-3J3QMG8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trav13d-3J3QMG8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.59■□□□□ 0.57
Trav13d-3J3QMG8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav13d-3J3QMG8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav13d-3J3QMG8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Trav13d-3J3QMG8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav13d-3J3QMG8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Trav13d-3J3QMG8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav13d-3J3QMG8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trav13d-3J3QMG8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trav13d-3J3QMG8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trav13d-3J3QMG8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav13d-3J3QMG8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav13d-3J3QMG8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav13d-3J3QMG8 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Trav13d-3J3QMG8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav13d-3J3QMG8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav13d-3J3QMG8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trav13d-3J3QMG8 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.58■□□□□ 0.56
Trav13d-3J3QMG8 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.58■□□□□ 0.56
Trav13d-3J3QMG8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Trav13d-3J3QMG8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Trav13d-3J3QMG8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav13d-3J3QMG8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
Trav13d-3J3QMG8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav13d-3J3QMG8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav13d-3J3QMG8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms