Protein–RNA interactions for Protein: J3QM76

Ccdc179, Coiled-coil domain-containing protein 179, mousemouse

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc179J3QM76 Gm6934-201ENSMUST00000194780 1905 ntBASIC13.34□□□□□ -0.27
Ccdc179J3QM76 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc179J3QM76 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ccdc179J3QM76 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc179J3QM76 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Ccdc179J3QM76 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc179J3QM76 Gm8093-201ENSMUST00000128935 1892 ntBASIC13.33□□□□□ -0.27
Ccdc179J3QM76 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc179J3QM76 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc179J3QM76 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Ccdc179J3QM76 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc179J3QM76 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc179J3QM76 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc179J3QM76 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccdc179J3QM76 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc179J3QM76 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccdc179J3QM76 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc179J3QM76 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc179J3QM76 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc179J3QM76 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc179J3QM76 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc179J3QM76 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc179J3QM76 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc179J3QM76 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc179J3QM76 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc179J3QM76 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc179J3QM76 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccdc179J3QM76 Gm14523-201ENSMUST00000117260 558 ntBASIC13.32□□□□□ -0.28
Ccdc179J3QM76 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC13.32□□□□□ -0.28
Ccdc179J3QM76 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccdc179J3QM76 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc179J3QM76 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc179J3QM76 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc179J3QM76 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc179J3QM76 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc179J3QM76 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ccdc179J3QM76 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc179J3QM76 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc179J3QM76 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc179J3QM76 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc179J3QM76 Gm7332-201ENSMUST00000118351 454 ntBASIC13.31□□□□□ -0.28
Ccdc179J3QM76 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc179J3QM76 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc179J3QM76 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc179J3QM76 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc179J3QM76 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc179J3QM76 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc179J3QM76 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc179J3QM76 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc179J3QM76 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccdc179J3QM76 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc179J3QM76 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccdc179J3QM76 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc179J3QM76 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc179J3QM76 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc179J3QM76 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc179J3QM76 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc179J3QM76 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc179J3QM76 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc179J3QM76 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc179J3QM76 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc179J3QM76 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc179J3QM76 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc179J3QM76 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc179J3QM76 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ccdc179J3QM76 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc179J3QM76 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc179J3QM76 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc179J3QM76 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc179J3QM76 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc179J3QM76 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC13.29□□□□□ -0.28
Ccdc179J3QM76 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc179J3QM76 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc179J3QM76 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc179J3QM76 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc179J3QM76 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC13.28□□□□□ -0.28
Ccdc179J3QM76 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC13.28□□□□□ -0.28
Ccdc179J3QM76 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc179J3QM76 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc179J3QM76 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc179J3QM76 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc179J3QM76 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc179J3QM76 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc179J3QM76 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc179J3QM76 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc179J3QM76 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc179J3QM76 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc179J3QM76 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Ccdc179J3QM76 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc179J3QM76 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Ccdc179J3QM76 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc179J3QM76 Gm11175-201ENSMUST00000116172 543 ntBASIC13.27□□□□□ -0.29
Ccdc179J3QM76 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC13.27□□□□□ -0.29
Ccdc179J3QM76 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc179J3QM76 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc179J3QM76 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC13.27□□□□□ -0.29
Ccdc179J3QM76 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Ccdc179J3QM76 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc179J3QM76 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc179J3QM76 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms