Protein–RNA interactions for Protein: H3BKF4

Gm20708, Predicted gene 20708, mousemouse

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm20708H3BKF4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm20708H3BKF4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm20708H3BKF4 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm20708H3BKF4 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm20708H3BKF4 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Gm20708H3BKF4 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm20708H3BKF4 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm20708H3BKF4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.9■□□□□ 0.46
Gm20708H3BKF4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gm20708H3BKF4 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm20708H3BKF4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm20708H3BKF4 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Gm20708H3BKF4 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Gm20708H3BKF4 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Gm20708H3BKF4 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm20708H3BKF4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm20708H3BKF4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm20708H3BKF4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm20708H3BKF4 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gm20708H3BKF4 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.88■□□□□ 0.45
Gm20708H3BKF4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm20708H3BKF4 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm20708H3BKF4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.88■□□□□ 0.45
Gm20708H3BKF4 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Gm20708H3BKF4 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm20708H3BKF4 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Gm20708H3BKF4 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.88■□□□□ 0.45
Gm20708H3BKF4 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.88■□□□□ 0.45
Gm20708H3BKF4 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.88■□□□□ 0.45
Gm20708H3BKF4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.88■□□□□ 0.45
Gm20708H3BKF4 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Gm20708H3BKF4 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.87■□□□□ 0.45
Gm20708H3BKF4 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm20708H3BKF4 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
Gm20708H3BKF4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.87■□□□□ 0.45
Gm20708H3BKF4 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm20708H3BKF4 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Gm20708H3BKF4 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Gm20708H3BKF4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm20708H3BKF4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Gm20708H3BKF4 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Gm20708H3BKF4 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.86■□□□□ 0.45
Gm20708H3BKF4 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.86■□□□□ 0.45
Gm20708H3BKF4 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm20708H3BKF4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm20708H3BKF4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm20708H3BKF4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Gm20708H3BKF4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.85■□□□□ 0.45
Gm20708H3BKF4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.85■□□□□ 0.45
Gm20708H3BKF4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Gm20708H3BKF4 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Gm20708H3BKF4 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.85■□□□□ 0.45
Gm20708H3BKF4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.85■□□□□ 0.45
Gm20708H3BKF4 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm20708H3BKF4 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Gm20708H3BKF4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Gm20708H3BKF4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm20708H3BKF4 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm20708H3BKF4 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm20708H3BKF4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm20708H3BKF4 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm20708H3BKF4 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm20708H3BKF4 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gm20708H3BKF4 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.83■□□□□ 0.45
Gm20708H3BKF4 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Gm20708H3BKF4 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gm20708H3BKF4 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Gm20708H3BKF4 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Gm20708H3BKF4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Gm20708H3BKF4 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gm20708H3BKF4 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm20708H3BKF4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Gm20708H3BKF4 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.82■□□□□ 0.44
Gm20708H3BKF4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.82■□□□□ 0.44
Gm20708H3BKF4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Gm20708H3BKF4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Gm20708H3BKF4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm20708H3BKF4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.8■□□□□ 0.44
Gm20708H3BKF4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Gm20708H3BKF4 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Gm20708H3BKF4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.8■□□□□ 0.44
Gm20708H3BKF4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Gm20708H3BKF4 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm20708H3BKF4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm20708H3BKF4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Gm20708H3BKF4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm20708H3BKF4 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm20708H3BKF4 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm20708H3BKF4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm20708H3BKF4 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm20708H3BKF4 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Gm20708H3BKF4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.79■□□□□ 0.44
Gm20708H3BKF4 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm20708H3BKF4 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.79■□□□□ 0.44
Gm20708H3BKF4 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm20708H3BKF4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Gm20708H3BKF4 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm20708H3BKF4 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm20708H3BKF4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm20708H3BKF4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms