Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.56■■□□□ 1.04
Ccdc149F6V035 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc149F6V035 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.56■■□□□ 1.04
Ccdc149F6V035 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Ccdc149F6V035 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc149F6V035 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Ccdc149F6V035 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc149F6V035 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.55■■□□□ 1.04
Ccdc149F6V035 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc149F6V035 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc149F6V035 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc149F6V035 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc149F6V035 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc149F6V035 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc149F6V035 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.53■■□□□ 1.04
Ccdc149F6V035 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc149F6V035 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc149F6V035 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Ccdc149F6V035 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc149F6V035 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
Ccdc149F6V035 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc149F6V035 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Ccdc149F6V035 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc149F6V035 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc149F6V035 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.52■■□□□ 1.04
Ccdc149F6V035 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.52■■□□□ 1.04
Ccdc149F6V035 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc149F6V035 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc149F6V035 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc149F6V035 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Ccdc149F6V035 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc149F6V035 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc149F6V035 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc149F6V035 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.51■■□□□ 1.03
Ccdc149F6V035 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc149F6V035 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.51■■□□□ 1.03
Ccdc149F6V035 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.51■■□□□ 1.03
Ccdc149F6V035 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc149F6V035 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc149F6V035 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc149F6V035 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc149F6V035 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc149F6V035 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.49■■□□□ 1.03
Ccdc149F6V035 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc149F6V035 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc149F6V035 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
Ccdc149F6V035 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc149F6V035 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.48■■□□□ 1.03
Ccdc149F6V035 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Ccdc149F6V035 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.48■■□□□ 1.03
Ccdc149F6V035 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc149F6V035 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Ccdc149F6V035 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc149F6V035 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.47■■□□□ 1.03
Ccdc149F6V035 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Ccdc149F6V035 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc149F6V035 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc149F6V035 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
Ccdc149F6V035 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc149F6V035 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc149F6V035 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Ccdc149F6V035 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc149F6V035 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Ccdc149F6V035 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc149F6V035 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc149F6V035 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc149F6V035 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc149F6V035 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc149F6V035 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc149F6V035 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc149F6V035 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc149F6V035 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc149F6V035 Gm21956-201ENSMUST00000179946 522 ntBASIC21.45■■□□□ 1.02
Ccdc149F6V035 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.45■■□□□ 1.02
Ccdc149F6V035 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc149F6V035 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc149F6V035 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc149F6V035 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc149F6V035 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
Ccdc149F6V035 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc149F6V035 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Ccdc149F6V035 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc149F6V035 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Ccdc149F6V035 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc149F6V035 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.44■■□□□ 1.02
Ccdc149F6V035 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc149F6V035 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.44■■□□□ 1.02
Ccdc149F6V035 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc149F6V035 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
Ccdc149F6V035 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Ccdc149F6V035 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
Ccdc149F6V035 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc149F6V035 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Ccdc149F6V035 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.43■■□□□ 1.02
Ccdc149F6V035 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Ccdc149F6V035 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc149F6V035 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc149F6V035 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Ccdc149F6V035 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc149F6V035 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms