Protein–RNA interactions for Protein: E9Q0B4

Cdr1, Cerebellar degeneration-related antigen 1, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdr1E9Q0B4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdr1E9Q0B4 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Cdr1E9Q0B4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdr1E9Q0B4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdr1E9Q0B4 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Cdr1E9Q0B4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdr1E9Q0B4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdr1E9Q0B4 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdr1E9Q0B4 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdr1E9Q0B4 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Cdr1E9Q0B4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Cdr1E9Q0B4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdr1E9Q0B4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdr1E9Q0B4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cdr1E9Q0B4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdr1E9Q0B4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdr1E9Q0B4 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cdr1E9Q0B4 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Cdr1E9Q0B4 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdr1E9Q0B4 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.79■□□□□ 0.92
Cdr1E9Q0B4 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdr1E9Q0B4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Cdr1E9Q0B4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdr1E9Q0B4 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdr1E9Q0B4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Cdr1E9Q0B4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdr1E9Q0B4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdr1E9Q0B4 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdr1E9Q0B4 Nkain2-201ENSMUST00000092602 558 ntBASIC20.78■□□□□ 0.92
Cdr1E9Q0B4 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdr1E9Q0B4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cdr1E9Q0B4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdr1E9Q0B4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Cdr1E9Q0B4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.78■□□□□ 0.92
Cdr1E9Q0B4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.78■□□□□ 0.92
Cdr1E9Q0B4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdr1E9Q0B4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdr1E9Q0B4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdr1E9Q0B4 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdr1E9Q0B4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Cdr1E9Q0B4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdr1E9Q0B4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdr1E9Q0B4 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdr1E9Q0B4 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.76■□□□□ 0.91
Cdr1E9Q0B4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdr1E9Q0B4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdr1E9Q0B4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdr1E9Q0B4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.75■□□□□ 0.91
Cdr1E9Q0B4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Cdr1E9Q0B4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Cdr1E9Q0B4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdr1E9Q0B4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdr1E9Q0B4 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdr1E9Q0B4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdr1E9Q0B4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdr1E9Q0B4 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdr1E9Q0B4 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.73■□□□□ 0.91
Cdr1E9Q0B4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cdr1E9Q0B4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdr1E9Q0B4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdr1E9Q0B4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdr1E9Q0B4 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdr1E9Q0B4 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdr1E9Q0B4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdr1E9Q0B4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdr1E9Q0B4 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Cdr1E9Q0B4 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Cdr1E9Q0B4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdr1E9Q0B4 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.72■□□□□ 0.91
Cdr1E9Q0B4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdr1E9Q0B4 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdr1E9Q0B4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Cdr1E9Q0B4 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.71■□□□□ 0.91
Cdr1E9Q0B4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
Cdr1E9Q0B4 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdr1E9Q0B4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.71■□□□□ 0.91
Cdr1E9Q0B4 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdr1E9Q0B4 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdr1E9Q0B4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.71■□□□□ 0.91
Cdr1E9Q0B4 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
Cdr1E9Q0B4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cdr1E9Q0B4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.7■□□□□ 0.9
Cdr1E9Q0B4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Cdr1E9Q0B4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdr1E9Q0B4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdr1E9Q0B4 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cdr1E9Q0B4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.7■□□□□ 0.9
Cdr1E9Q0B4 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Cdr1E9Q0B4 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Cdr1E9Q0B4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdr1E9Q0B4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdr1E9Q0B4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdr1E9Q0B4 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdr1E9Q0B4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdr1E9Q0B4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdr1E9Q0B4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.68■□□□□ 0.9
Cdr1E9Q0B4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cdr1E9Q0B4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdr1E9Q0B4 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdr1E9Q0B4 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms