Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav12-1A0N8R1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav12-1A0N8R1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav12-1A0N8R1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav12-1A0N8R1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav12-1A0N8R1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav12-1A0N8R1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trav12-1A0N8R1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav12-1A0N8R1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav12-1A0N8R1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Trav12-1A0N8R1 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav12-1A0N8R1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav12-1A0N8R1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav12-1A0N8R1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav12-1A0N8R1 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav12-1A0N8R1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav12-1A0N8R1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav12-1A0N8R1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav12-1A0N8R1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav12-1A0N8R1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
Trav12-1A0N8R1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav12-1A0N8R1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav12-1A0N8R1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trav12-1A0N8R1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav12-1A0N8R1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav12-1A0N8R1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav12-1A0N8R1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav12-1A0N8R1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav12-1A0N8R1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trav12-1A0N8R1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.65■□□□□ 0.42
Trav12-1A0N8R1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav12-1A0N8R1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav12-1A0N8R1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav12-1A0N8R1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav12-1A0N8R1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav12-1A0N8R1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav12-1A0N8R1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trav12-1A0N8R1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trav12-1A0N8R1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav12-1A0N8R1 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav12-1A0N8R1 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav12-1A0N8R1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.64■□□□□ 0.41
Trav12-1A0N8R1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trav12-1A0N8R1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav12-1A0N8R1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.64■□□□□ 0.41
Trav12-1A0N8R1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav12-1A0N8R1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.63■□□□□ 0.41
Trav12-1A0N8R1 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.63■□□□□ 0.41
Trav12-1A0N8R1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
Trav12-1A0N8R1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav12-1A0N8R1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav12-1A0N8R1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav12-1A0N8R1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav12-1A0N8R1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav12-1A0N8R1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.62■□□□□ 0.41
Trav12-1A0N8R1 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.62■□□□□ 0.41
Trav12-1A0N8R1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.62■□□□□ 0.41
Trav12-1A0N8R1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav12-1A0N8R1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav12-1A0N8R1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav12-1A0N8R1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav12-1A0N8R1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav12-1A0N8R1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trav12-1A0N8R1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav12-1A0N8R1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav12-1A0N8R1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Trav12-1A0N8R1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav12-1A0N8R1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav12-1A0N8R1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Trav12-1A0N8R1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav12-1A0N8R1 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav12-1A0N8R1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav12-1A0N8R1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav12-1A0N8R1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Trav12-1A0N8R1 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.61■□□□□ 0.41
Trav12-1A0N8R1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav12-1A0N8R1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav12-1A0N8R1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Trav12-1A0N8R1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.6■□□□□ 0.41
Trav12-1A0N8R1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav12-1A0N8R1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav12-1A0N8R1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav12-1A0N8R1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav12-1A0N8R1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trav12-1A0N8R1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Trav12-1A0N8R1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav12-1A0N8R1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav12-1A0N8R1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav12-1A0N8R1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav12-1A0N8R1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav12-1A0N8R1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav12-1A0N8R1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Trav12-1A0N8R1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav12-1A0N8R1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav12-1A0N8R1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trav12-1A0N8R1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav12-1A0N8R1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Trav12-1A0N8R1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav12-1A0N8R1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav12-1A0N8R1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms