Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lnp1A0A1B0GSK3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.6■□□□□ 0.41
Lnp1A0A1B0GSK3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lnp1A0A1B0GSK3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.6■□□□□ 0.41
Lnp1A0A1B0GSK3 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lnp1A0A1B0GSK3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Lnp1A0A1B0GSK3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lnp1A0A1B0GSK3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lnp1A0A1B0GSK3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lnp1A0A1B0GSK3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lnp1A0A1B0GSK3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lnp1A0A1B0GSK3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lnp1A0A1B0GSK3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lnp1A0A1B0GSK3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lnp1A0A1B0GSK3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lnp1A0A1B0GSK3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Lnp1A0A1B0GSK3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lnp1A0A1B0GSK3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Lnp1A0A1B0GSK3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Lnp1A0A1B0GSK3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Lnp1A0A1B0GSK3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.58■□□□□ 0.4
Lnp1A0A1B0GSK3 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lnp1A0A1B0GSK3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Lnp1A0A1B0GSK3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Lnp1A0A1B0GSK3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lnp1A0A1B0GSK3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lnp1A0A1B0GSK3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Lnp1A0A1B0GSK3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lnp1A0A1B0GSK3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lnp1A0A1B0GSK3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lnp1A0A1B0GSK3 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.57■□□□□ 0.4
Lnp1A0A1B0GSK3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lnp1A0A1B0GSK3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Lnp1A0A1B0GSK3 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lnp1A0A1B0GSK3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lnp1A0A1B0GSK3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lnp1A0A1B0GSK3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lnp1A0A1B0GSK3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lnp1A0A1B0GSK3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lnp1A0A1B0GSK3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Lnp1A0A1B0GSK3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lnp1A0A1B0GSK3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lnp1A0A1B0GSK3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lnp1A0A1B0GSK3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.54■□□□□ 0.4
Lnp1A0A1B0GSK3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lnp1A0A1B0GSK3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lnp1A0A1B0GSK3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.54■□□□□ 0.4
Lnp1A0A1B0GSK3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.54■□□□□ 0.4
Lnp1A0A1B0GSK3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.54■□□□□ 0.4
Lnp1A0A1B0GSK3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lnp1A0A1B0GSK3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lnp1A0A1B0GSK3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lnp1A0A1B0GSK3 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.54■□□□□ 0.4
Lnp1A0A1B0GSK3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lnp1A0A1B0GSK3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lnp1A0A1B0GSK3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.53■□□□□ 0.4
Lnp1A0A1B0GSK3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lnp1A0A1B0GSK3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Lnp1A0A1B0GSK3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lnp1A0A1B0GSK3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.53■□□□□ 0.4
Lnp1A0A1B0GSK3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lnp1A0A1B0GSK3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lnp1A0A1B0GSK3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lnp1A0A1B0GSK3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lnp1A0A1B0GSK3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lnp1A0A1B0GSK3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.52■□□□□ 0.4
Lnp1A0A1B0GSK3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Lnp1A0A1B0GSK3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.52■□□□□ 0.4
Lnp1A0A1B0GSK3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lnp1A0A1B0GSK3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lnp1A0A1B0GSK3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lnp1A0A1B0GSK3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lnp1A0A1B0GSK3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lnp1A0A1B0GSK3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lnp1A0A1B0GSK3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lnp1A0A1B0GSK3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.51■□□□□ 0.39
Lnp1A0A1B0GSK3 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.51■□□□□ 0.39
Lnp1A0A1B0GSK3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lnp1A0A1B0GSK3 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lnp1A0A1B0GSK3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lnp1A0A1B0GSK3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms