Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav7-1A0A0G2JEV5 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav7-1A0A0G2JEV5 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.27■□□□□ 0.2
Trav7-1A0A0G2JEV5 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav7-1A0A0G2JEV5 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav7-1A0A0G2JEV5 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav7-1A0A0G2JEV5 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC16.27■□□□□ 0.2
Trav7-1A0A0G2JEV5 Scarna2-201ENSMUST00000157560 414 ntBASIC16.27■□□□□ 0.2
Trav7-1A0A0G2JEV5 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav7-1A0A0G2JEV5 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trav7-1A0A0G2JEV5 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav7-1A0A0G2JEV5 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trav7-1A0A0G2JEV5 Gm9806-201ENSMUST00000051080 552 ntBASIC16.26■□□□□ 0.19
Trav7-1A0A0G2JEV5 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav7-1A0A0G2JEV5 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav7-1A0A0G2JEV5 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav7-1A0A0G2JEV5 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav7-1A0A0G2JEV5 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav7-1A0A0G2JEV5 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav7-1A0A0G2JEV5 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav7-1A0A0G2JEV5 Gm16437-201ENSMUST00000025669 507 ntBASIC16.25■□□□□ 0.19
Trav7-1A0A0G2JEV5 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav7-1A0A0G2JEV5 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Trav7-1A0A0G2JEV5 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav7-1A0A0G2JEV5 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav7-1A0A0G2JEV5 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav7-1A0A0G2JEV5 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav7-1A0A0G2JEV5 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trav7-1A0A0G2JEV5 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav7-1A0A0G2JEV5 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav7-1A0A0G2JEV5 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav7-1A0A0G2JEV5 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav7-1A0A0G2JEV5 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav7-1A0A0G2JEV5 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav7-1A0A0G2JEV5 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
Trav7-1A0A0G2JEV5 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav7-1A0A0G2JEV5 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav7-1A0A0G2JEV5 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav7-1A0A0G2JEV5 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav7-1A0A0G2JEV5 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav7-1A0A0G2JEV5 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav7-1A0A0G2JEV5 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav7-1A0A0G2JEV5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav7-1A0A0G2JEV5 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav7-1A0A0G2JEV5 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Trav7-1A0A0G2JEV5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trav7-1A0A0G2JEV5 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav7-1A0A0G2JEV5 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav7-1A0A0G2JEV5 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav7-1A0A0G2JEV5 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16.22■□□□□ 0.19
Trav7-1A0A0G2JEV5 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC16.22■□□□□ 0.19
Trav7-1A0A0G2JEV5 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav7-1A0A0G2JEV5 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav7-1A0A0G2JEV5 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trav7-1A0A0G2JEV5 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trav7-1A0A0G2JEV5 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7-1A0A0G2JEV5 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7-1A0A0G2JEV5 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7-1A0A0G2JEV5 AC151971.4-201ENSMUST00000214717 704 ntBASIC16.21■□□□□ 0.19
Trav7-1A0A0G2JEV5 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7-1A0A0G2JEV5 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7-1A0A0G2JEV5 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7-1A0A0G2JEV5 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7-1A0A0G2JEV5 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav7-1A0A0G2JEV5 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7-1A0A0G2JEV5 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7-1A0A0G2JEV5 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7-1A0A0G2JEV5 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7-1A0A0G2JEV5 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
Trav7-1A0A0G2JEV5 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7-1A0A0G2JEV5 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7-1A0A0G2JEV5 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7-1A0A0G2JEV5 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7-1A0A0G2JEV5 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.2■□□□□ 0.18
Trav7-1A0A0G2JEV5 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7-1A0A0G2JEV5 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.19■□□□□ 0.18
Trav7-1A0A0G2JEV5 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7-1A0A0G2JEV5 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav7-1A0A0G2JEV5 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7-1A0A0G2JEV5 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7-1A0A0G2JEV5 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7-1A0A0G2JEV5 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7-1A0A0G2JEV5 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav7-1A0A0G2JEV5 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trav7-1A0A0G2JEV5 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7-1A0A0G2JEV5 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7-1A0A0G2JEV5 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav7-1A0A0G2JEV5 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7-1A0A0G2JEV5 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7-1A0A0G2JEV5 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7-1A0A0G2JEV5 Gm11687-201ENSMUST00000118911 886 ntBASIC16.18■□□□□ 0.18
Trav7-1A0A0G2JEV5 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7-1A0A0G2JEV5 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7-1A0A0G2JEV5 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7-1A0A0G2JEV5 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trav7-1A0A0G2JEV5 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7-1A0A0G2JEV5 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trav7-1A0A0G2JEV5 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7-1A0A0G2JEV5 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7-1A0A0G2JEV5 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms