Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC15.89■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav3n-3A0A0G2JEM0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC15.86■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC15.86■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav3n-3A0A0G2JEM0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC15.86■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Gm9910-201ENSMUST00000195385 1550 ntBASIC15.86■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Golph3-202ENSMUST00000226517 2359 ntBASIC15.86■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Trav3n-3A0A0G2JEM0 AC153911.1-201ENSMUST00000220378 758 ntBASIC15.85■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Gm4799-201ENSMUST00000095396 657 ntBASIC15.85■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.85■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav3n-3A0A0G2JEM0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Gm8503-201ENSMUST00000118131 455 ntBASIC15.83■□□□□ 0.12
Trav3n-3A0A0G2JEM0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Gm9812-201ENSMUST00000061934 968 ntBASIC15.83■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.83■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.82■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trav3n-3A0A0G2JEM0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav3n-3A0A0G2JEM0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC15.8■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trav3n-3A0A0G2JEM0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC15.8■□□□□ 0.12
Trav3n-3A0A0G2JEM0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Gm28731-201ENSMUST00000185564 1569 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms