Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC15.79■□□□□ 0.12
Trav19A0A0B4J1K4 Gm44428-201ENSMUST00000204474 874 ntBASIC15.79■□□□□ 0.12
Trav19A0A0B4J1K4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC15.79■□□□□ 0.12
Trav19A0A0B4J1K4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav19A0A0B4J1K4 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav19A0A0B4J1K4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC15.78■□□□□ 0.12
Trav19A0A0B4J1K4 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav19A0A0B4J1K4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav19A0A0B4J1K4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav19A0A0B4J1K4 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav19A0A0B4J1K4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav19A0A0B4J1K4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Trav19A0A0B4J1K4 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Trav19A0A0B4J1K4 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav19A0A0B4J1K4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Trav19A0A0B4J1K4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav19A0A0B4J1K4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav19A0A0B4J1K4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trav19A0A0B4J1K4 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav19A0A0B4J1K4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav19A0A0B4J1K4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav19A0A0B4J1K4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav19A0A0B4J1K4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav19A0A0B4J1K4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trav19A0A0B4J1K4 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav19A0A0B4J1K4 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav19A0A0B4J1K4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav19A0A0B4J1K4 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav19A0A0B4J1K4 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav19A0A0B4J1K4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav19A0A0B4J1K4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav19A0A0B4J1K4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC15.75■□□□□ 0.11
Trav19A0A0B4J1K4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav19A0A0B4J1K4 AC117769.4-201ENSMUST00000225679 685 ntBASIC15.75■□□□□ 0.11
Trav19A0A0B4J1K4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav19A0A0B4J1K4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav19A0A0B4J1K4 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav19A0A0B4J1K4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav19A0A0B4J1K4 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav19A0A0B4J1K4 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.74■□□□□ 0.11
Trav19A0A0B4J1K4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Trav19A0A0B4J1K4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav19A0A0B4J1K4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC15.74■□□□□ 0.11
Trav19A0A0B4J1K4 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav19A0A0B4J1K4 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav19A0A0B4J1K4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav19A0A0B4J1K4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav19A0A0B4J1K4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav19A0A0B4J1K4 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav19A0A0B4J1K4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav19A0A0B4J1K4 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav19A0A0B4J1K4 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav19A0A0B4J1K4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav19A0A0B4J1K4 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav19A0A0B4J1K4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav19A0A0B4J1K4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav19A0A0B4J1K4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
Trav19A0A0B4J1K4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav19A0A0B4J1K4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav19A0A0B4J1K4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav19A0A0B4J1K4 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav19A0A0B4J1K4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav19A0A0B4J1K4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav19A0A0B4J1K4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav19A0A0B4J1K4 Hsf1-207ENSMUST00000228371 2102 ntBASIC15.71■□□□□ 0.11
Trav19A0A0B4J1K4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav19A0A0B4J1K4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav19A0A0B4J1K4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav19A0A0B4J1K4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav19A0A0B4J1K4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Trav19A0A0B4J1K4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav19A0A0B4J1K4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav19A0A0B4J1K4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Trav19A0A0B4J1K4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav19A0A0B4J1K4 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav19A0A0B4J1K4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav19A0A0B4J1K4 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav19A0A0B4J1K4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav19A0A0B4J1K4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav19A0A0B4J1K4 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trav19A0A0B4J1K4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav19A0A0B4J1K4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav19A0A0B4J1K4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav19A0A0B4J1K4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav19A0A0B4J1K4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav19A0A0B4J1K4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav19A0A0B4J1K4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav19A0A0B4J1K4 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC15.69■□□□□ 0.1
Trav19A0A0B4J1K4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav19A0A0B4J1K4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav19A0A0B4J1K4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav19A0A0B4J1K4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Trav19A0A0B4J1K4 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trav19A0A0B4J1K4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav19A0A0B4J1K4 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav19A0A0B4J1K4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav19A0A0B4J1K4 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav19A0A0B4J1K4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav19A0A0B4J1K4 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Trav19A0A0B4J1K4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms