Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Igkv5-43A0A0B4J1J2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Igkv5-43A0A0B4J1J2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Igkv5-43A0A0B4J1J2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Igkv5-43A0A0B4J1J2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.9■■□□□ 1.1
Igkv5-43A0A0B4J1J2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.9■■□□□ 1.1
Igkv5-43A0A0B4J1J2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Igkv5-43A0A0B4J1J2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Igkv5-43A0A0B4J1J2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.89■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.89■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Igkv5-43A0A0B4J1J2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.88■■□□□ 1.09
Igkv5-43A0A0B4J1J2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.88■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.88■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.87■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.87■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.86■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.86■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.86■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.86■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.85■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.85■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Igkv5-43A0A0B4J1J2 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.85■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Igkv5-43A0A0B4J1J2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.09
Igkv5-43A0A0B4J1J2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.83■■□□□ 1.09
Igkv5-43A0A0B4J1J2 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.82■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.82■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.82■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.82■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Igkv5-43A0A0B4J1J2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.81■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Gm22238-201ENSMUST00000175222 88 ntBASIC21.81■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.79■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.77■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Igkv5-43A0A0B4J1J2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.77■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Igkv5-43A0A0B4J1J2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.77■■□□□ 1.07
Igkv5-43A0A0B4J1J2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms