Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv5A0A0B4J1G9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv5A0A0B4J1G9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv5A0A0B4J1G9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Trbv5A0A0B4J1G9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv5A0A0B4J1G9 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC16.98■□□□□ 0.31
Trbv5A0A0B4J1G9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv5A0A0B4J1G9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trbv5A0A0B4J1G9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv5A0A0B4J1G9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv5A0A0B4J1G9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv5A0A0B4J1G9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv5A0A0B4J1G9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv5A0A0B4J1G9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv5A0A0B4J1G9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv5A0A0B4J1G9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv5A0A0B4J1G9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trbv5A0A0B4J1G9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv5A0A0B4J1G9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv5A0A0B4J1G9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv5A0A0B4J1G9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv5A0A0B4J1G9 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv5A0A0B4J1G9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv5A0A0B4J1G9 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC16.96■□□□□ 0.31
Trbv5A0A0B4J1G9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv5A0A0B4J1G9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trbv5A0A0B4J1G9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv5A0A0B4J1G9 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv5A0A0B4J1G9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv5A0A0B4J1G9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv5A0A0B4J1G9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv5A0A0B4J1G9 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.95■□□□□ 0.3
Trbv5A0A0B4J1G9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trbv5A0A0B4J1G9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv5A0A0B4J1G9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv5A0A0B4J1G9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv5A0A0B4J1G9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv5A0A0B4J1G9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv5A0A0B4J1G9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv5A0A0B4J1G9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv5A0A0B4J1G9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.94■□□□□ 0.3
Trbv5A0A0B4J1G9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv5A0A0B4J1G9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Trbv5A0A0B4J1G9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trbv5A0A0B4J1G9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv5A0A0B4J1G9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv5A0A0B4J1G9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv5A0A0B4J1G9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trbv5A0A0B4J1G9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16.93■□□□□ 0.3
Trbv5A0A0B4J1G9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv5A0A0B4J1G9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv5A0A0B4J1G9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv5A0A0B4J1G9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv5A0A0B4J1G9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.93■□□□□ 0.3
Trbv5A0A0B4J1G9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.92■□□□□ 0.3
Trbv5A0A0B4J1G9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv5A0A0B4J1G9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trbv5A0A0B4J1G9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv5A0A0B4J1G9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trbv5A0A0B4J1G9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Trbv5A0A0B4J1G9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC16.92■□□□□ 0.3
Trbv5A0A0B4J1G9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trbv5A0A0B4J1G9 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trbv5A0A0B4J1G9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC16.92■□□□□ 0.3
Trbv5A0A0B4J1G9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv5A0A0B4J1G9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv5A0A0B4J1G9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv5A0A0B4J1G9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv5A0A0B4J1G9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv5A0A0B4J1G9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv5A0A0B4J1G9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trbv5A0A0B4J1G9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv5A0A0B4J1G9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv5A0A0B4J1G9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv5A0A0B4J1G9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC16.91■□□□□ 0.3
Trbv5A0A0B4J1G9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv5A0A0B4J1G9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv5A0A0B4J1G9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv5A0A0B4J1G9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv5A0A0B4J1G9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv5A0A0B4J1G9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv5A0A0B4J1G9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Trbv5A0A0B4J1G9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16.9■□□□□ 0.3
Trbv5A0A0B4J1G9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trbv5A0A0B4J1G9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.9■□□□□ 0.3
Trbv5A0A0B4J1G9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv5A0A0B4J1G9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv5A0A0B4J1G9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv5A0A0B4J1G9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv5A0A0B4J1G9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trbv5A0A0B4J1G9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv5A0A0B4J1G9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC16.89■□□□□ 0.29
Trbv5A0A0B4J1G9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv5A0A0B4J1G9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv5A0A0B4J1G9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv5A0A0B4J1G9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv5A0A0B4J1G9 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.88■□□□□ 0.29
Trbv5A0A0B4J1G9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv5A0A0B4J1G9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv5A0A0B4J1G9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms