Protein–RNA interactions for Protein: A0A0B4J1G8

Trbv2, T cell receptor beta, variable 2 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv2A0A0B4J1G8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv2A0A0B4J1G8 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv2A0A0B4J1G8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv2A0A0B4J1G8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Trbv2A0A0B4J1G8 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv2A0A0B4J1G8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv2A0A0B4J1G8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.79■□□□□ 0.6
Trbv2A0A0B4J1G8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Trbv2A0A0B4J1G8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv2A0A0B4J1G8 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trbv2A0A0B4J1G8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv2A0A0B4J1G8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv2A0A0B4J1G8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Trbv2A0A0B4J1G8 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv2A0A0B4J1G8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv2A0A0B4J1G8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.78■□□□□ 0.6
Trbv2A0A0B4J1G8 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv2A0A0B4J1G8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv2A0A0B4J1G8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.77■□□□□ 0.6
Trbv2A0A0B4J1G8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Trbv2A0A0B4J1G8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbv2A0A0B4J1G8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbv2A0A0B4J1G8 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbv2A0A0B4J1G8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbv2A0A0B4J1G8 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Trbv2A0A0B4J1G8 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbv2A0A0B4J1G8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.77■□□□□ 0.6
Trbv2A0A0B4J1G8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.77■□□□□ 0.6
Trbv2A0A0B4J1G8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.77■□□□□ 0.6
Trbv2A0A0B4J1G8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Trbv2A0A0B4J1G8 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbv2A0A0B4J1G8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trbv2A0A0B4J1G8 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Trbv2A0A0B4J1G8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv2A0A0B4J1G8 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trbv2A0A0B4J1G8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Trbv2A0A0B4J1G8 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv2A0A0B4J1G8 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv2A0A0B4J1G8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv2A0A0B4J1G8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trbv2A0A0B4J1G8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv2A0A0B4J1G8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv2A0A0B4J1G8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv2A0A0B4J1G8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv2A0A0B4J1G8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv2A0A0B4J1G8 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv2A0A0B4J1G8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Trbv2A0A0B4J1G8 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv2A0A0B4J1G8 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv2A0A0B4J1G8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv2A0A0B4J1G8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv2A0A0B4J1G8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv2A0A0B4J1G8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv2A0A0B4J1G8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.74■□□□□ 0.59
Trbv2A0A0B4J1G8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.74■□□□□ 0.59
Trbv2A0A0B4J1G8 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv2A0A0B4J1G8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv2A0A0B4J1G8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv2A0A0B4J1G8 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv2A0A0B4J1G8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv2A0A0B4J1G8 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Trbv2A0A0B4J1G8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv2A0A0B4J1G8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv2A0A0B4J1G8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv2A0A0B4J1G8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
Trbv2A0A0B4J1G8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.73■□□□□ 0.59
Trbv2A0A0B4J1G8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv2A0A0B4J1G8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv2A0A0B4J1G8 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv2A0A0B4J1G8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv2A0A0B4J1G8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv2A0A0B4J1G8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv2A0A0B4J1G8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv2A0A0B4J1G8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv2A0A0B4J1G8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.72■□□□□ 0.59
Trbv2A0A0B4J1G8 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv2A0A0B4J1G8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv2A0A0B4J1G8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Trbv2A0A0B4J1G8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv2A0A0B4J1G8 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv2A0A0B4J1G8 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv2A0A0B4J1G8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.71■□□□□ 0.59
Trbv2A0A0B4J1G8 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Trbv2A0A0B4J1G8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.71■□□□□ 0.59
Trbv2A0A0B4J1G8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv2A0A0B4J1G8 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.71■□□□□ 0.59
Trbv2A0A0B4J1G8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv2A0A0B4J1G8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv2A0A0B4J1G8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv2A0A0B4J1G8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.7■□□□□ 0.58
Trbv2A0A0B4J1G8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv2A0A0B4J1G8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trbv2A0A0B4J1G8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv2A0A0B4J1G8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv2A0A0B4J1G8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv2A0A0B4J1G8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv2A0A0B4J1G8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv2A0A0B4J1G8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv2A0A0B4J1G8 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.69■□□□□ 0.58
Trbv2A0A0B4J1G8 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms