Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trbc1A0A0A6YWV4 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trbc1A0A0A6YWV4 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.42■□□□□ 0.7
Trbc1A0A0A6YWV4 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trbc1A0A0A6YWV4 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.42■□□□□ 0.7
Trbc1A0A0A6YWV4 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trbc1A0A0A6YWV4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trbc1A0A0A6YWV4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trbc1A0A0A6YWV4 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trbc1A0A0A6YWV4 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trbc1A0A0A6YWV4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trbc1A0A0A6YWV4 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Trbc1A0A0A6YWV4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trbc1A0A0A6YWV4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trbc1A0A0A6YWV4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
Trbc1A0A0A6YWV4 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trbc1A0A0A6YWV4 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.4■□□□□ 0.7
Trbc1A0A0A6YWV4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Trbc1A0A0A6YWV4 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbc1A0A0A6YWV4 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Trbc1A0A0A6YWV4 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbc1A0A0A6YWV4 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbc1A0A0A6YWV4 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trbc1A0A0A6YWV4 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trbc1A0A0A6YWV4 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Trbc1A0A0A6YWV4 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trbc1A0A0A6YWV4 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trbc1A0A0A6YWV4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trbc1A0A0A6YWV4 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Trbc1A0A0A6YWV4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trbc1A0A0A6YWV4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trbc1A0A0A6YWV4 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trbc1A0A0A6YWV4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trbc1A0A0A6YWV4 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trbc1A0A0A6YWV4 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trbc1A0A0A6YWV4 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Trbc1A0A0A6YWV4 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trbc1A0A0A6YWV4 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trbc1A0A0A6YWV4 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.37■□□□□ 0.69
Trbc1A0A0A6YWV4 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.37■□□□□ 0.69
Trbc1A0A0A6YWV4 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trbc1A0A0A6YWV4 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trbc1A0A0A6YWV4 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trbc1A0A0A6YWV4 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trbc1A0A0A6YWV4 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.36■□□□□ 0.69
Trbc1A0A0A6YWV4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Trbc1A0A0A6YWV4 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Trbc1A0A0A6YWV4 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.36■□□□□ 0.69
Trbc1A0A0A6YWV4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trbc1A0A0A6YWV4 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trbc1A0A0A6YWV4 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trbc1A0A0A6YWV4 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trbc1A0A0A6YWV4 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.36■□□□□ 0.69
Trbc1A0A0A6YWV4 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trbc1A0A0A6YWV4 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.36■□□□□ 0.69
Trbc1A0A0A6YWV4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trbc1A0A0A6YWV4 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trbc1A0A0A6YWV4 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbc1A0A0A6YWV4 Gm15546-201ENSMUST00000122095 826 ntBASIC19.35■□□□□ 0.69
Trbc1A0A0A6YWV4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.35■□□□□ 0.69
Trbc1A0A0A6YWV4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbc1A0A0A6YWV4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbc1A0A0A6YWV4 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbc1A0A0A6YWV4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trbc1A0A0A6YWV4 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbc1A0A0A6YWV4 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbc1A0A0A6YWV4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbc1A0A0A6YWV4 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbc1A0A0A6YWV4 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbc1A0A0A6YWV4 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbc1A0A0A6YWV4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Trbc1A0A0A6YWV4 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trbc1A0A0A6YWV4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Trbc1A0A0A6YWV4 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trbc1A0A0A6YWV4 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trbc1A0A0A6YWV4 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trbc1A0A0A6YWV4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.32■□□□□ 0.68
Trbc1A0A0A6YWV4 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trbc1A0A0A6YWV4 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trbc1A0A0A6YWV4 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.32■□□□□ 0.68
Trbc1A0A0A6YWV4 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.32■□□□□ 0.68
Trbc1A0A0A6YWV4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trbc1A0A0A6YWV4 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trbc1A0A0A6YWV4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trbc1A0A0A6YWV4 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trbc1A0A0A6YWV4 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.31■□□□□ 0.68
Trbc1A0A0A6YWV4 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trbc1A0A0A6YWV4 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Trbc1A0A0A6YWV4 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trbc1A0A0A6YWV4 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trbc1A0A0A6YWV4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trbc1A0A0A6YWV4 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trbc1A0A0A6YWV4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trbc1A0A0A6YWV4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trbc1A0A0A6YWV4 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trbc1A0A0A6YWV4 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbc1A0A0A6YWV4 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.3■□□□□ 0.68
Trbc1A0A0A6YWV4 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.3■□□□□ 0.68
Trbc1A0A0A6YWV4 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Trbc1A0A0A6YWV4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms