Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Gm7199-201ENSMUST00000118327 1485 ntBASIC15.49■□□□□ 0.07
Trav16d-dv11A0A075B617 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trav16d-dv11A0A075B617 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav16d-dv11A0A075B617 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav16d-dv11A0A075B617 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav16d-dv11A0A075B617 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav16d-dv11A0A075B617 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav16d-dv11A0A075B617 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Trav16d-dv11A0A075B617 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav16d-dv11A0A075B617 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav16d-dv11A0A075B617 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav16d-dv11A0A075B617 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav16d-dv11A0A075B617 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav16d-dv11A0A075B617 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav16d-dv11A0A075B617 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav16d-dv11A0A075B617 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav16d-dv11A0A075B617 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trav16d-dv11A0A075B617 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav16d-dv11A0A075B617 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav16d-dv11A0A075B617 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav16d-dv11A0A075B617 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav16d-dv11A0A075B617 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trav16d-dv11A0A075B617 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav16d-dv11A0A075B617 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Trav16d-dv11A0A075B617 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav16d-dv11A0A075B617 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC15.47■□□□□ 0.07
Trav16d-dv11A0A075B617 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC15.47■□□□□ 0.07
Trav16d-dv11A0A075B617 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav16d-dv11A0A075B617 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav16d-dv11A0A075B617 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav16d-dv11A0A075B617 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trav16d-dv11A0A075B617 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav16d-dv11A0A075B617 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav16d-dv11A0A075B617 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav16d-dv11A0A075B617 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Trav16d-dv11A0A075B617 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav16d-dv11A0A075B617 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav16d-dv11A0A075B617 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav16d-dv11A0A075B617 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav16d-dv11A0A075B617 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav16d-dv11A0A075B617 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav16d-dv11A0A075B617 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC15.46■□□□□ 0.06
Trav16d-dv11A0A075B617 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav16d-dv11A0A075B617 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav16d-dv11A0A075B617 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav16d-dv11A0A075B617 Gm15043-201ENSMUST00000118843 1543 ntBASIC15.45■□□□□ 0.06
Trav16d-dv11A0A075B617 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav16d-dv11A0A075B617 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav16d-dv11A0A075B617 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav16d-dv11A0A075B617 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trav16d-dv11A0A075B617 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav16d-dv11A0A075B617 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav16d-dv11A0A075B617 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav16d-dv11A0A075B617 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav16d-dv11A0A075B617 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav16d-dv11A0A075B617 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav16d-dv11A0A075B617 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav16d-dv11A0A075B617 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav16d-dv11A0A075B617 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav16d-dv11A0A075B617 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav16d-dv11A0A075B617 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav16d-dv11A0A075B617 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trav16d-dv11A0A075B617 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Trav16d-dv11A0A075B617 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav16d-dv11A0A075B617 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav16d-dv11A0A075B617 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav16d-dv11A0A075B617 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav16d-dv11A0A075B617 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav16d-dv11A0A075B617 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trav16d-dv11A0A075B617 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trav16d-dv11A0A075B617 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav16d-dv11A0A075B617 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav16d-dv11A0A075B617 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trav16d-dv11A0A075B617 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav16d-dv11A0A075B617 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav16d-dv11A0A075B617 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav16d-dv11A0A075B617 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav16d-dv11A0A075B617 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC15.41■□□□□ 0.06
Trav16d-dv11A0A075B617 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav16d-dv11A0A075B617 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Trav16d-dv11A0A075B617 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Trav16d-dv11A0A075B617 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav16d-dv11A0A075B617 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav16d-dv11A0A075B617 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav16d-dv11A0A075B617 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav16d-dv11A0A075B617 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav16d-dv11A0A075B617 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav16d-dv11A0A075B617 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav16d-dv11A0A075B617 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav16d-dv11A0A075B617 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav16d-dv11A0A075B617 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC15.4■□□□□ 0.06
Trav16d-dv11A0A075B617 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC15.4■□□□□ 0.06
Trav16d-dv11A0A075B617 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav16d-dv11A0A075B617 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trav16d-dv11A0A075B617 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav16d-dv11A0A075B617 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav16d-dv11A0A075B617 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav16d-dv11A0A075B617 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav16d-dv11A0A075B617 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trav16d-dv11A0A075B617 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms