Protein–RNA interactions for Protein: Q9D6C3

3830403N18Rik, MCG113545, isoform CRA_a, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
3830403N18RikQ9D6C3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.96■■■□□ 2.23
3830403N18RikQ9D6C3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
3830403N18RikQ9D6C3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.93■■■□□ 2.22
3830403N18RikQ9D6C3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.93■■■□□ 2.22
3830403N18RikQ9D6C3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
3830403N18RikQ9D6C3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.91■■■□□ 2.22
3830403N18RikQ9D6C3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
3830403N18RikQ9D6C3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.85■■■□□ 2.21
3830403N18RikQ9D6C3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.82■■■□□ 2.2
3830403N18RikQ9D6C3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
3830403N18RikQ9D6C3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.74■■■□□ 2.19
3830403N18RikQ9D6C3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
3830403N18RikQ9D6C3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28.68■■■□□ 2.18
3830403N18RikQ9D6C3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.68■■■□□ 2.18
3830403N18RikQ9D6C3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
3830403N18RikQ9D6C3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
3830403N18RikQ9D6C3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.6■■■□□ 2.17
3830403N18RikQ9D6C3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
3830403N18RikQ9D6C3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
3830403N18RikQ9D6C3 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
3830403N18RikQ9D6C3 Rab21-202ENSMUST00000218831 843 ntBASIC28.5■■■□□ 2.15
3830403N18RikQ9D6C3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
3830403N18RikQ9D6C3 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
3830403N18RikQ9D6C3 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.45■■■□□ 2.14
3830403N18RikQ9D6C3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
3830403N18RikQ9D6C3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
3830403N18RikQ9D6C3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
3830403N18RikQ9D6C3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
3830403N18RikQ9D6C3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
3830403N18RikQ9D6C3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC28.35■■■□□ 2.13
3830403N18RikQ9D6C3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
3830403N18RikQ9D6C3 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
3830403N18RikQ9D6C3 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
3830403N18RikQ9D6C3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
3830403N18RikQ9D6C3 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
3830403N18RikQ9D6C3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.3■■■□□ 2.12
3830403N18RikQ9D6C3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
3830403N18RikQ9D6C3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
3830403N18RikQ9D6C3 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
3830403N18RikQ9D6C3 Zfp131-207ENSMUST00000224946 1783 ntBASIC28.24■■■□□ 2.11
3830403N18RikQ9D6C3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
3830403N18RikQ9D6C3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
3830403N18RikQ9D6C3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC28.2■■■□□ 2.11
3830403N18RikQ9D6C3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
3830403N18RikQ9D6C3 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
3830403N18RikQ9D6C3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.19■■■□□ 2.1
3830403N18RikQ9D6C3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.19■■■□□ 2.1
3830403N18RikQ9D6C3 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
3830403N18RikQ9D6C3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28.17■■■□□ 2.1
3830403N18RikQ9D6C3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
3830403N18RikQ9D6C3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
3830403N18RikQ9D6C3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.1■■■□□ 2.09
3830403N18RikQ9D6C3 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
3830403N18RikQ9D6C3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
3830403N18RikQ9D6C3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
3830403N18RikQ9D6C3 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
3830403N18RikQ9D6C3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
3830403N18RikQ9D6C3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28.01■■■□□ 2.07
3830403N18RikQ9D6C3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28■■■□□ 2.07
3830403N18RikQ9D6C3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.99■■■□□ 2.07
3830403N18RikQ9D6C3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
3830403N18RikQ9D6C3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
3830403N18RikQ9D6C3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
3830403N18RikQ9D6C3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
3830403N18RikQ9D6C3 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
3830403N18RikQ9D6C3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
3830403N18RikQ9D6C3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
3830403N18RikQ9D6C3 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27.83■■■□□ 2.05
3830403N18RikQ9D6C3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
3830403N18RikQ9D6C3 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
3830403N18RikQ9D6C3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
3830403N18RikQ9D6C3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC27.78■■■□□ 2.04
3830403N18RikQ9D6C3 Gm25262-201ENSMUST00000174934 133 ntBASIC27.78■■■□□ 2.04
3830403N18RikQ9D6C3 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
3830403N18RikQ9D6C3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC27.75■■■□□ 2.03
3830403N18RikQ9D6C3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.7■■■□□ 2.02
3830403N18RikQ9D6C3 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.69■■■□□ 2.02
3830403N18RikQ9D6C3 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
3830403N18RikQ9D6C3 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
3830403N18RikQ9D6C3 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
3830403N18RikQ9D6C3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
3830403N18RikQ9D6C3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27.63■■■□□ 2.01
3830403N18RikQ9D6C3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.62■■■□□ 2.01
3830403N18RikQ9D6C3 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
3830403N18RikQ9D6C3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
3830403N18RikQ9D6C3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC27.59■■■□□ 2.01
3830403N18RikQ9D6C3 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.58■■■□□ 2.01
3830403N18RikQ9D6C3 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.57■■■□□ 2
3830403N18RikQ9D6C3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.56■■■□□ 2
3830403N18RikQ9D6C3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
3830403N18RikQ9D6C3 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.53■■■□□ 2
3830403N18RikQ9D6C3 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.5■■□□□ 1.99
3830403N18RikQ9D6C3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
3830403N18RikQ9D6C3 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
3830403N18RikQ9D6C3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
3830403N18RikQ9D6C3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
3830403N18RikQ9D6C3 Mipep-204ENSMUST00000225043 1548 ntBASIC27.44■■□□□ 1.98
3830403N18RikQ9D6C3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
3830403N18RikQ9D6C3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
3830403N18RikQ9D6C3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms