Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28,74■■■□□ 2,19
Rnf135Q9CWS1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28,73■■■□□ 2,19
Rnf135Q9CWS1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28,72■■■□□ 2,19
Rnf135Q9CWS1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28,72■■■□□ 2,19
Rnf135Q9CWS1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28,7■■■□□ 2,19
Rnf135Q9CWS1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28,68■■■□□ 2,18
Rnf135Q9CWS1 Gm25262-201ENSMUST00000174934 133 ntBASIC28,68■■■□□ 2,18
Rnf135Q9CWS1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28,63■■■□□ 2,17
Rnf135Q9CWS1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28,62■■■□□ 2,17
Rnf135Q9CWS1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28,6■■■□□ 2,17
Rnf135Q9CWS1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28,58■■■□□ 2,17
Rnf135Q9CWS1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28,53■■■□□ 2,16
Rnf135Q9CWS1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28,48■■■□□ 2,15
Rnf135Q9CWS1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28,44■■■□□ 2,14
Rnf135Q9CWS1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28,36■■■□□ 2,13
Rnf135Q9CWS1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28,36■■■□□ 2,13
Rnf135Q9CWS1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28,33■■■□□ 2,13
Rnf135Q9CWS1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28,28■■■□□ 2,12
Rnf135Q9CWS1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28,28■■■□□ 2,12
Rnf135Q9CWS1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28,24■■■□□ 2,11
Rnf135Q9CWS1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28,24■■■□□ 2,11
Rnf135Q9CWS1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28,2■■■□□ 2,1
Rnf135Q9CWS1 Rab21-202ENSMUST00000218831 843 ntBASIC28,2■■■□□ 2,1
Rnf135Q9CWS1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC28,2■■■□□ 2,1
Rnf135Q9CWS1 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28,19■■■□□ 2,1
Rnf135Q9CWS1 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28,18■■■□□ 2,1
Rnf135Q9CWS1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28,17■■■□□ 2,1
Rnf135Q9CWS1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28,17■■■□□ 2,1
Rnf135Q9CWS1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28,16■■■□□ 2,1
Rnf135Q9CWS1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28,15■■■□□ 2,1
Rnf135Q9CWS1 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28,11■■■□□ 2,09
Rnf135Q9CWS1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC28,11■■■□□ 2,09
Rnf135Q9CWS1 Gm26115-201ENSMUST00000175605 87 ntBASIC28,07■■■□□ 2,08
Rnf135Q9CWS1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28,06■■■□□ 2,08
Rnf135Q9CWS1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28,05■■■□□ 2,08
Rnf135Q9CWS1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC28,04■■■□□ 2,08
Rnf135Q9CWS1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28,02■■■□□ 2,08
Rnf135Q9CWS1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2,07
Rnf135Q9CWS1 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27,98■■■□□ 2,07
Rnf135Q9CWS1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27,98■■■□□ 2,07
Rnf135Q9CWS1 Zfp131-207ENSMUST00000224946 1783 ntBASIC27,96■■■□□ 2,07
Rnf135Q9CWS1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27,92■■■□□ 2,06
Rnf135Q9CWS1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27,92■■■□□ 2,06
Rnf135Q9CWS1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27,9■■■□□ 2,06
Rnf135Q9CWS1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC27,89■■■□□ 2,06
Rnf135Q9CWS1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC27,88■■■□□ 2,05
Rnf135Q9CWS1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27,88■■■□□ 2,05
Rnf135Q9CWS1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27,88■■■□□ 2,05
Rnf135Q9CWS1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27,86■■■□□ 2,05
Rnf135Q9CWS1 Gm8109-201ENSMUST00000194076 746 ntBASIC27,85■■■□□ 2,05
Rnf135Q9CWS1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27,84■■■□□ 2,05
Rnf135Q9CWS1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27,84■■■□□ 2,05
Rnf135Q9CWS1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27,83■■■□□ 2,04
Rnf135Q9CWS1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27,81■■■□□ 2,04
Rnf135Q9CWS1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27,8■■■□□ 2,04
Rnf135Q9CWS1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27,79■■■□□ 2,04
Rnf135Q9CWS1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27,76■■■□□ 2,03
Rnf135Q9CWS1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27,75■■■□□ 2,03
Rnf135Q9CWS1 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27,75■■■□□ 2,03
Rnf135Q9CWS1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27,74■■■□□ 2,03
Rnf135Q9CWS1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27,72■■■□□ 2,03
Rnf135Q9CWS1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27,7■■■□□ 2,02
Rnf135Q9CWS1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27,7■■■□□ 2,02
Rnf135Q9CWS1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27,67■■■□□ 2,02
Rnf135Q9CWS1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27,66■■■□□ 2,02
Rnf135Q9CWS1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27,65■■■□□ 2,02
Rnf135Q9CWS1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27,64■■■□□ 2,02
Rnf135Q9CWS1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27,62■■■□□ 2,01
Rnf135Q9CWS1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27,62■■■□□ 2,01
Rnf135Q9CWS1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27,6■■■□□ 2,01
Rnf135Q9CWS1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27,6■■■□□ 2,01
Rnf135Q9CWS1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27,58■■■□□ 2,01
Rnf135Q9CWS1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27,58■■■□□ 2,01
Rnf135Q9CWS1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27,58■■■□□ 2,01
Rnf135Q9CWS1 Gm2415-204ENSMUST00000190235 2004 ntBASIC27,57■■■□□ 2
Rnf135Q9CWS1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27,55■■■□□ 2
Rnf135Q9CWS1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27,53■■■□□ 2
Rnf135Q9CWS1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27,52■■■□□ 2
Rnf135Q9CWS1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27,51■■□□□ 1,99
Rnf135Q9CWS1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27,51■■□□□ 1,99
Rnf135Q9CWS1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27,47■■□□□ 1,99
Rnf135Q9CWS1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27,47■■□□□ 1,99
Rnf135Q9CWS1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27,46■■□□□ 1,99
Rnf135Q9CWS1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27,42■■□□□ 1,98
Rnf135Q9CWS1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27,39■■□□□ 1,98
Rnf135Q9CWS1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27,36■■□□□ 1,97
Rnf135Q9CWS1 Gm6658-202ENSMUST00000209493 1885 ntBASIC27,34■■□□□ 1,97
Rnf135Q9CWS1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27,33■■□□□ 1,97
Rnf135Q9CWS1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27,33■■□□□ 1,97
Rnf135Q9CWS1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27,33■■□□□ 1,97
Rnf135Q9CWS1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27,27■■□□□ 1,96
Rnf135Q9CWS1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27,27■■□□□ 1,96
Rnf135Q9CWS1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27,22■■□□□ 1,95
Rnf135Q9CWS1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27,22■■□□□ 1,95
Rnf135Q9CWS1 Gm17082-201ENSMUST00000166043 1091 ntBASIC27,21■■□□□ 1,95
Rnf135Q9CWS1 AL845457.1-201ENSMUST00000197244 68 ntBASIC27,21■■□□□ 1,95
Rnf135Q9CWS1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27,21■■□□□ 1,95
Rnf135Q9CWS1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27,2■■□□□ 1,95
Rnf135Q9CWS1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27,2■■□□□ 1,94
Rnf135Q9CWS1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27,19■■□□□ 1,94
Retrieved 100 of 76,532 protein–RNA pairs in 8,2 ms