Protein–RNA interactions for Protein: Q9CQI6

Cotl1, Coactosin-like protein, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cotl1Q9CQI6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cotl1Q9CQI6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cotl1Q9CQI6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cotl1Q9CQI6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cotl1Q9CQI6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cotl1Q9CQI6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cotl1Q9CQI6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cotl1Q9CQI6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Cotl1Q9CQI6 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Cotl1Q9CQI6 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cotl1Q9CQI6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cotl1Q9CQI6 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cotl1Q9CQI6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Cotl1Q9CQI6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cotl1Q9CQI6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Cotl1Q9CQI6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Cotl1Q9CQI6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cotl1Q9CQI6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cotl1Q9CQI6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cotl1Q9CQI6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cotl1Q9CQI6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cotl1Q9CQI6 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cotl1Q9CQI6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cotl1Q9CQI6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cotl1Q9CQI6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cotl1Q9CQI6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cotl1Q9CQI6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.51■□□□□ 0.87
Cotl1Q9CQI6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.51■□□□□ 0.87
Cotl1Q9CQI6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cotl1Q9CQI6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cotl1Q9CQI6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cotl1Q9CQI6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cotl1Q9CQI6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cotl1Q9CQI6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cotl1Q9CQI6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cotl1Q9CQI6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.45■□□□□ 0.86
Cotl1Q9CQI6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cotl1Q9CQI6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Cotl1Q9CQI6 Gm27325-201ENSMUST00000175467 74 ntBASIC20.41■□□□□ 0.86
Cotl1Q9CQI6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cotl1Q9CQI6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cotl1Q9CQI6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Cotl1Q9CQI6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cotl1Q9CQI6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cotl1Q9CQI6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cotl1Q9CQI6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Cotl1Q9CQI6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cotl1Q9CQI6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Cotl1Q9CQI6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cotl1Q9CQI6 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Cotl1Q9CQI6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cotl1Q9CQI6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cotl1Q9CQI6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cotl1Q9CQI6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cotl1Q9CQI6 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.26■□□□□ 0.83
Cotl1Q9CQI6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.26■□□□□ 0.83
Cotl1Q9CQI6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Cotl1Q9CQI6 Gm25238-201ENSMUST00000174914 89 ntBASIC20.26■□□□□ 0.83
Cotl1Q9CQI6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cotl1Q9CQI6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cotl1Q9CQI6 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cotl1Q9CQI6 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cotl1Q9CQI6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cotl1Q9CQI6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cotl1Q9CQI6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Cotl1Q9CQI6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cotl1Q9CQI6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cotl1Q9CQI6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cotl1Q9CQI6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cotl1Q9CQI6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cotl1Q9CQI6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cotl1Q9CQI6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cotl1Q9CQI6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cotl1Q9CQI6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.18■□□□□ 0.82
Cotl1Q9CQI6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cotl1Q9CQI6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cotl1Q9CQI6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cotl1Q9CQI6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cotl1Q9CQI6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cotl1Q9CQI6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cotl1Q9CQI6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cotl1Q9CQI6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Cotl1Q9CQI6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cotl1Q9CQI6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cotl1Q9CQI6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cotl1Q9CQI6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cotl1Q9CQI6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20.07■□□□□ 0.8
Cotl1Q9CQI6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cotl1Q9CQI6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cotl1Q9CQI6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cotl1Q9CQI6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cotl1Q9CQI6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.02■□□□□ 0.8
Cotl1Q9CQI6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cotl1Q9CQI6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Cotl1Q9CQI6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cotl1Q9CQI6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20■□□□□ 0.79
Cotl1Q9CQI6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Cotl1Q9CQI6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cotl1Q9CQI6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cotl1Q9CQI6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms